RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ST6GALNAC6Q969X2 333 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 ADTRPQ96IZ2 230 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 TXN2Q99757 166 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 NABP2Q9BQ15 211 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 SIRT7Q9NRC8 400 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 TCF19Q9Y242 345 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 C15orf61A6NNL5 157 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 ADCYAP1P18509 176 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 ARF6P62330 175 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 PJVKQ0ZLH3 352 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 OR9G1Q8NH87 305 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 TIMD4Q96H15 378 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 FAM208BQ5VWN6 2430 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 IFNA5P01569 189 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 APOC3P02656 99 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 GPX4P36969 197 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 GNB2P62879 340 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 CCL20P78556 96 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 RTL8BQ17RB0 113 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 TM4SF20Q53R12 229 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 HARBI1Q96MB7 349 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 CHODLQ9H9P2 273 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 HEYLQ9NQ87 328 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 MIOXQ9UGB7 285 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 A0A087X0M5 115 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 A0A1B0GX30 115 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 A0A1W2PRD5 423 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 A0A1W2PRF3 423 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 A0A1W2PRM7 423 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 DFFBO76075 338 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 VDAC2P45880 294 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 HBG1P69891 147 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 HBG2P69892 147 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 BLOC1S1P78537 153 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 KLRD1Q13241 179 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 ATRAIDQ6UW56 229 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 MARVELD3Q96A59 401 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 NEU1Q99519 415 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 TSNAXQ99598 290 aaKnown RBP10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 IFNA10P01566 189 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 LDLRAD2Q5SZI1 272 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 S100A7AQ86SG5 101 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 Q8N7P7 452 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 OR5AN1Q8NGI8 311 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 ZNF596Q8TC21 504 aa10.33□□□□□ -0.76
VIPAS39-206ENST00000553888 HRASP01112 189 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 STAG3L3P0CL85 134 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 F2RL1P55085 397 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 ELLP55199 621 aaPredicted RBP10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 LRRC75BQ2VPJ9 315 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 TGIF2LXQ8IUE1 241 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 PNKDQ8N490 385 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 SSX3Q99909 188 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 WDR61Q9GZS3 305 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 PATZ1Q9HBE1 687 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 TPSG1Q9NRR2 321 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 TMEM14BQ9NUH8 114 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 OR51B2Q9Y5P1 312 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 A0A1W2PN81 502 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 E7EUB6 86 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 TSPAN15O95858 294 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 ZFP36P26651 326 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 CHRNA7P36544 502 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 GPR6P46095 362 aaPredicted RBP10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 SSX7Q7RTT5 188 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 LINC00311Q8N616 119 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 SCGB1C1Q8TD33 95 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 RAB39BQ96DA2 213 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 SSBP3Q9BWW4 388 aaPredicted RBP10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 CENPEQ02224 2701 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 ABCA2Q9BZC7 2435 aa10.32□□□□□ -0.76
VIPAS39-206ENST00000553888 FAM90A9PA6NNJ1 464 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 KRBOX1C9JBD0 128 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 ENSAO43768 121 aaKnown RBP10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 IGLV1-47P01700 117 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 APOA2P02652 100 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 ARG1P05089 322 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 DEFA4P12838 97 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 CNTFRP26992 372 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 C10orf55Q5SWW7 151 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 OR10P1Q8NGE3 313 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 OR10W1Q8NGF6 305 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 LYPD6BQ8NI32 183 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 TMEM186Q96B77 213 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 CIB3Q96Q77 187 aaPredicted RBP10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 LRRK2Q5S007 2527 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 UPK2O00526 184 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 FSTL3O95633 263 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 HLA-DRB5Q30154 266 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 IL34Q6ZMJ4 242 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 ZNF429Q86V71 674 aa10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 TAF15Q92804 592 aaKnown RBP eCLIP10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 GNPNAT1Q96EK6 184 aaPredicted RBP10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 FOXA2Q9Y261 457 aaPredicted RBP10.31□□□□□ -0.76
VIPAS39-206ENST00000553888 TMEM218A2RU14 115 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 IL6RP08887 468 aaPredicted RBP10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 DEFA5Q01523 94 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 POU2AF1Q16633 256 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 AKR1C8PQ5T2L2 129 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 LY6G5BQ8NDX9 201 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms