RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 DNMBPQ6XZF7 1577 aa2.61□□□□□ -1.99
TDP1-207ENST00000553617 DOCK6Q96HP0 2047 aa2.61□□□□□ -1.99
TDP1-207ENST00000553617 ITGB4P16144 1822 aa2.61□□□□□ -1.99
TDP1-207ENST00000553617 OTOFQ9HC10 1997 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 TRAV8-1A0A0A6YYK1 113 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 PNMA8CA0A1B0GUJ8 204 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 FFAR1O14842 300 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 CD5LO43866 347 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 SNAPC5O75971 98 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 DPM2O94777 84 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 IFNA7P01567 189 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 TRBV12-3P01733 135 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 APODP05090 189 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 CECR9P0C854 216 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 OR12D1P0DN82 309 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 BCL2P10415 239 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 CSRP1P21291 193 aaKnown RBP2.6□□□□□ -1.99
TDP1-207ENST00000553617 PPIBP23284 216 aaKnown RBP2.6□□□□□ -1.99
TDP1-207ENST00000553617 S100A2P29034 98 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 BRS3P32247 399 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 CCR2P41597 374 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 CXCL5P42830 114 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 LPAR6P43657 344 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 ZNF136P52737 540 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 KRTAP10-12P60413 245 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 RHOGP84095 191 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 SLC38A11Q08AI6 406 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 ENDOGQ14249 297 aaKnown RBP2.6□□□□□ -1.99
TDP1-207ENST00000553617 C16orf72Q14CZ0 275 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 ABCA11PQ4W5N1 156 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 TCEAL5Q5H9L2 206 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 BCL2L15Q5TBC7 163 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 GLT8D1Q68CQ7 371 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 WDR59Q6PJI9 974 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 CLEC20AQ6ZU45 233 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 ZNF584Q8IVC4 421 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 ZNF695Q8IW36 515 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 SLC25A45Q8N413 288 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.6□□□□□ -1.99
TDP1-207ENST00000553617 OR11G2Q8NGC1 345 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 OR2T27Q8NH04 317 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 PP6455Q8WZ26 134 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 CARD19Q96LW7 228 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 IGF2BP2-AS1Q96M15 143 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 AP1S3Q96PC3 154 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 DERL3Q96Q80 235 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 CHAC1Q9BUX1 264 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 COMMD5Q9GZQ3 224 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 EIF5A2Q9GZV4 153 aaKnown RBP2.6□□□□□ -1.99
TDP1-207ENST00000553617 PARP12Q9H0J9 701 aaKnown RBP2.6□□□□□ -1.99
TDP1-207ENST00000553617 RPUSD1Q9UJJ7 312 aaKnown RBP2.6□□□□□ -1.99
TDP1-207ENST00000553617 HES2Q9Y543 173 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 NUP214P35658 2090 aaPredicted RBP2.6□□□□□ -1.99
TDP1-207ENST00000553617 ZNF106Q9H2Y7 1883 aaKnown RBP2.6□□□□□ -1.99
TDP1-207ENST00000553617 DOCK5Q9H7D0 1870 aa2.6□□□□□ -1.99
TDP1-207ENST00000553617 PLCH2O75038 1416 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 DCCP43146 1447 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 PHLPP1O60346 1717 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 CDC42BPBQ9Y5S2 1711 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 CITO14578 2027 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 DENND4BO75064 1496 aaPredicted RBP2.59□□□□□ -1.99
TDP1-207ENST00000553617 FOCADQ5VW36 1801 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 KMT2EQ8IZD2 1858 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 TRBV19A0A075B6N1 114 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 SMIM26A0A096LP01 95 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 IGHV3-74A0A0B4J1X5 117 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 TRAV4A0A0B4J268 109 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 LOC389332A0A1B0GUA5 103 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 SPAARA0A1B0GVQ0 90 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 TMEM212A6NML5 194 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 CYSRT1A8MQ03 144 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 H7BYZ3 331 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 UBFD1O14562 309 aaKnown RBP2.59□□□□□ -1.99
TDP1-207ENST00000553617 PSPHP1O15172 72 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 MAS1P04201 325 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 GPX1P07203 203 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 LINC00694P0DN24 101 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 ATP6V0CP27449 155 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 MP68P56378 58 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 S100A10P60903 97 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 HERVK_113P61574 105 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 MEF2BQ02080 365 aaPredicted RBP2.59□□□□□ -1.99
TDP1-207ENST00000553617 ERCC8Q13216 396 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 DHRS2Q13268 280 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 ZNF404Q494X3 552 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 C6orf99Q4VX62 202 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 FKBP1CQ5VVH2 108 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 NXNL2Q5VZ03 156 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 DNAJC24Q6P3W2 148 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 LINC00337Q8N6G1 96 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 OR4C16Q8NGL9 310 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 SLC25A40Q8TBP6 338 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 TMEM158Q8WZ71 300 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 FRZBQ92765 325 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 TMEM106AQ96A25 262 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 NEURL3Q96EH8 262 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 LINC00527Q9UJ94 153 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 ANAPC10Q9UM13 185 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 POMPQ9Y244 141 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 CYSLTR1Q9Y271 337 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms