RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 VWC2Q2TAL6 325 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 FAM74A3Q4VXF1 159 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 OR4A47Q6IF82 309 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 C8orf31Q8N9H6 132 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 FOXA2Q9Y261 457 aaPredicted RBP12.51□□□□□ -0.41
ABCD4-218ENST00000553486 IFNA10P01566 189 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 FGF7P21781 194 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 VDAC2P45880 294 aaPredicted RBP12.51□□□□□ -0.41
ABCD4-218ENST00000553486 NPBWR1P48145 328 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 LINC00311Q8N616 119 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 CLRN3Q8NCR9 226 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 MBD3L1Q8WWY6 194 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 MBD6Q96DN6 1003 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 TCF19Q9Y242 345 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 NAV3Q8IVL0 2385 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 TRBV23-1A0A0A0MS06 115 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 MBP02144 154 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 APOA2P02652 100 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 HOXA1P49639 335 aaPredicted RBP12.5□□□□□ -0.41
ABCD4-218ENST00000553486 ERVFRD-1P60508 538 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 HSPE1P61604 102 aaKnown RBP12.5□□□□□ -0.41
ABCD4-218ENST00000553486 TMEM155Q4W5P6 130 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 FAM71F2Q6NXP2 309 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 ZNF709Q8N972 641 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 OR13D1Q8NGV5 346 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 ZNF596Q8TC21 504 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 ENY2Q9NPA8 101 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 TMEM14BQ9NUH8 114 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 PRNDQ9UKY0 176 aa12.5□□□□□ -0.41
ABCD4-218ENST00000553486 C17orf112F2Z3M2 114 aa12.49□□□□□ -0.41
ABCD4-218ENST00000553486 COL8A2P25067 703 aa12.49□□□□□ -0.41
ABCD4-218ENST00000553486 DLX6P56179 175 aa12.49□□□□□ -0.41
ABCD4-218ENST00000553486 RPS16P62249 146 aaKnown RBP12.49□□□□□ -0.41
ABCD4-218ENST00000553486 RAB11AP62491 216 aa12.49□□□□□ -0.41
ABCD4-218ENST00000553486 OR10X1Q8NGY0 326 aa12.49□□□□□ -0.41
ABCD4-218ENST00000553486 C17orf50Q8WW18 174 aa12.49□□□□□ -0.41
ABCD4-218ENST00000553486 RARRES2Q99969 163 aa12.49□□□□□ -0.41
ABCD4-218ENST00000553486 VSIRQ9H7M9 311 aa12.49□□□□□ -0.41
ABCD4-218ENST00000553486 UNKLQ9H9P5 680 aaKnown RBP12.49□□□□□ -0.41
ABCD4-218ENST00000553486 J3QR06 171 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 GOSR1O95249 250 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 ELLP55199 621 aaPredicted RBP12.48□□□□□ -0.41
ABCD4-218ENST00000553486 HAGHQ16775 308 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 ZNF506Q5JVG8 444 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 CLDND2Q8NHS1 167 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 OSR1Q8TAX0 266 aaPredicted RBP12.48□□□□□ -0.41
ABCD4-218ENST00000553486 TMEM186Q96B77 213 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 GGACTQ9BVM4 153 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 RAB1BQ9H0U4 201 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 ZNRD1Q9P1U0 126 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 A0A087X0M5 115 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 A0A1B0GX30 115 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 UPK2O00526 184 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 HSPB1P04792 205 aaKnown RBP12.48□□□□□ -0.41
ABCD4-218ENST00000553486 IL6RP08887 468 aaPredicted RBP12.48□□□□□ -0.41
ABCD4-218ENST00000553486 KHDC3LQ587J8 217 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 ETV3LQ6ZN32 361 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 RCC1LQ96I51 464 aaKnown RBP12.48□□□□□ -0.41
ABCD4-218ENST00000553486 FKBP11Q9NYL4 201 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 OR51B2Q9Y5P1 312 aa12.48□□□□□ -0.41
ABCD4-218ENST00000553486 LYNX1G3V0Z9 82 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 OR13C7P0DN81 318 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 LYNX1P0DP58 116 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 MDKP21741 143 aaPredicted RBP12.47□□□□□ -0.41
ABCD4-218ENST00000553486 CD1BP29016 333 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 DEFB113Q30KQ7 82 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 SOHLH1Q5JUK2 328 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 TMEM88Q6PEY1 159 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 LCN15Q6UWW0 184 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 OR9G1Q8NH87 305 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 NPCDR1Q9BY65 106 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 MRPL20Q9BYC9 149 aaKnown RBP12.47□□□□□ -0.41
ABCD4-218ENST00000553486 CBLN4Q9NTU7 201 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 SLC39A9Q9NUM3 307 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 BET1LQ9NYM9 111 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 ZNF257Q9Y2Q1 563 aa12.47□□□□□ -0.41
ABCD4-218ENST00000553486 A0A1W2PPH5 198 aa12.46□□□□□ -0.41
ABCD4-218ENST00000553486 H7C2Y5 167 aa12.46□□□□□ -0.41
ABCD4-218ENST00000553486 SOX15O60248 233 aa12.46□□□□□ -0.41
ABCD4-218ENST00000553486 MPDU1O75352 247 aa12.46□□□□□ -0.41
ABCD4-218ENST00000553486 IGHV2-70P01814 119 aa12.46□□□□□ -0.41
ABCD4-218ENST00000553486 IGHV1-8P0DP01 117 aa12.46□□□□□ -0.41
ABCD4-218ENST00000553486 FOSL1P15407 271 aa12.46□□□□□ -0.41
ABCD4-218ENST00000553486 ATF4P18848 351 aaPredicted RBP12.46□□□□□ -0.41
ABCD4-218ENST00000553486 ICAM4Q14773 271 aa12.46□□□□□ -0.41
ABCD4-218ENST00000553486 ZNF726P1Q15940 193 aa12.46□□□□□ -0.41
ABCD4-218ENST00000553486 FFAR4Q5NUL3 377 aa12.46□□□□□ -0.41
ABCD4-218ENST00000553486 OR5AN1Q8NGI8 311 aa12.46□□□□□ -0.41
ABCD4-218ENST00000553486 MAP1LC3B2A6NCE7 125 aa12.46□□□□□ -0.42
ABCD4-218ENST00000553486 H0YJW9 148 aa12.46□□□□□ -0.42
ABCD4-218ENST00000553486 RRHO14718 337 aa12.46□□□□□ -0.42
ABCD4-218ENST00000553486 KBTBD11O94819 623 aa12.46□□□□□ -0.42
ABCD4-218ENST00000553486 IGKV1-16P04430 117 aa12.46□□□□□ -0.42
ABCD4-218ENST00000553486 IFNA4P05014 189 aa12.46□□□□□ -0.42
ABCD4-218ENST00000553486 SRP19P09132 144 aaKnown RBP12.46□□□□□ -0.42
ABCD4-218ENST00000553486 HOXB4P17483 251 aaPredicted RBP12.46□□□□□ -0.42
ABCD4-218ENST00000553486 IL3RAP26951 378 aa12.46□□□□□ -0.42
ABCD4-218ENST00000553486 DLK1P80370 383 aa12.46□□□□□ -0.42
ABCD4-218ENST00000553486 TMEM177Q53S58 311 aa12.46□□□□□ -0.42
ABCD4-218ENST00000553486 ACSM6Q6P461 480 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms