RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 NFYAP23511 347 aaPredicted RBP10.51□□□□□ -0.73
CHMP1A-210ENST00000551981 IRF3Q14653 427 aa10.51□□□□□ -0.73
CHMP1A-210ENST00000551981 ZNF502Q8TBZ5 544 aa10.51□□□□□ -0.73
CHMP1A-210ENST00000551981 GALNT14Q96FL9 552 aa10.51□□□□□ -0.73
CHMP1A-210ENST00000551981 AIFM2Q9BRQ8 373 aa10.51□□□□□ -0.73
CHMP1A-210ENST00000551981 C6orf62Q9GZU0 229 aaPredicted RBP10.51□□□□□ -0.73
CHMP1A-210ENST00000551981 SPATA2Q9UM82 520 aa10.51□□□□□ -0.73
CHMP1A-210ENST00000551981 IGHV3-35A0A0C4DH35 117 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 OR4C46A6NHA9 309 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 CYB5BO43169 146 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 IGLV2-14P01704 120 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 RPL35AP18077 110 aaKnown RBP10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 PTBP1P26599 531 aaKnown RBP eCLIP10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 FABP5Q01469 135 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 MLLT11Q13015 90 aaPredicted RBP10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 ZNF66Q6ZN08 573 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 SSX9Q7RTT3 188 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 OR4A5Q8NH83 315 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 TMEM190Q8WZ59 177 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 ZNF436Q9C0F3 470 aaPredicted RBP10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 MFFQ9GZY8 342 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 VCXQ9H320 206 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 DAZ1Q9NQZ3 744 aaKnown RBP10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 DNAH6Q9C0G6 4158 aa10.5□□□□□ -0.73
CHMP1A-210ENST00000551981 IFITM5A6NNB3 132 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 IFNA4P05014 189 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 RCN1Q15293 331 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 ODF3L2Q3SX64 289 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 OGFRL1Q5TC84 451 aaPredicted RBP10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 MFSD4AQ8N468 514 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 ATG5Q9H1Y0 275 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 DCSTAMPQ9H295 470 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 MAP6D1Q9H9H5 199 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 HRASLSQ9HDD0 168 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 BET1LQ9NYM9 111 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 TAS2R8Q9NYW2 309 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 TPRKBQ9Y3C4 175 aa10.49□□□□□ -0.73
CHMP1A-210ENST00000551981 IGKV1D-13A0A0B4J2D9 117 aa10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 TGOLN2O43493 480 aa10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 RGS10O43665 173 aa10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 IGKV1-13P0DP09 117 aa10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 EIF4EBP1Q13541 118 aaPredicted RBP10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 RBMS2Q15434 407 aaKnown RBP10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 CNIH2Q6PI25 160 aa10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 C11orf45Q8TAV5 145 aa10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 VN1R17PQ8TDU5 208 aa10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 GATAD1Q8WUU5 269 aa10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 SRSF8Q9BRL6 282 aaKnown RBP10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 COMMD5Q9GZQ3 224 aa10.48□□□□□ -0.73
CHMP1A-210ENST00000551981 TRAV1-2A0A0B4J238 106 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 MYL9P24844 172 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 FCGR2BP31994 310 aaPredicted RBP10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 TCTAP57738 103 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 OR10A3P58181 314 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 BRWD1-AS2P59051 145 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 OR2B8PP59922 312 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 TIMM50Q3ZCQ8 353 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 CDNFQ49AH0 187 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 HACD4Q5VWC8 232 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 OR5B3Q8NH48 314 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 BSCL2Q96G97 398 aaPredicted RBP10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 MGLLQ99685 303 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 FBXL17Q9UF56 701 aa10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 ELF5Q9UKW6 265 aaPredicted RBP10.47□□□□□ -0.73
CHMP1A-210ENST00000551981 IGLC7A0M8Q6 106 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 OR2T8A6NH00 312 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 CGB1A6NKQ9 187 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 MPTX1A8MV57 137 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 NDUFA4O00483 81 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 EBAG9O00559 213 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 RPA2P15927 270 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 CMC4P56277 68 aaPredicted RBP10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 NANOS2P60321 138 aaKnown RBP10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 SPSB3Q6PJ21 355 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 SPAG16Q8N0X2 631 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 CD300LFQ8TDQ1 290 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 C2CD4CQ8TF44 421 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 RARRES2Q99969 163 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 C20orf24Q9BUV8 137 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 CCDC90BQ9GZT6 254 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 CSTL1Q9H114 145 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 ANXA10Q9UJ72 324 aa10.46□□□□□ -0.73
CHMP1A-210ENST00000551981 CASQ2O14958 399 aaPredicted RBP10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 RBFOX2O43251 390 aaKnown RBP eCLIP10.45□□□□□ -0.744e-7■□□□□ 8.3
CHMP1A-210ENST00000551981 TNFSF12O43508 249 aa10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 S1PR2O95136 353 aa10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 RAB3BP20337 219 aa10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 TAS2R31P59538 309 aa10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 GNG2P59768 71 aa10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 MSMO1Q15800 293 aa10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 THOC7Q6I9Y2 204 aaKnown RBP10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 HSD17B13Q7Z5P4 300 aaPredicted RBP10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 GDPD1Q8N9F7 314 aa10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 ATP6V0BQ99437 205 aa10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 QTRT1Q9BXR0 403 aaKnown RBP10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 C11orf68Q9H3H3 251 aaKnown RBP10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 DUSP21Q9H596 190 aa10.45□□□□□ -0.74
CHMP1A-210ENST00000551981 K7EMT4 169 aa10.44□□□□□ -0.74
CHMP1A-210ENST00000551981 UPK2O00526 184 aa10.44□□□□□ -0.74
CHMP1A-210ENST00000551981 SCGNO76038 276 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms