RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 GYPAP02724 150 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 IFNA6P05013 189 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 HMGN2P05204 90 aaKnown RBP2.59□□□□□ -1.99
LIMA1-208ENST00000551691 BCHEP06276 602 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 RD3LP0DJH9 198 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 SPNP16150 400 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 PVALBP20472 110 aaPredicted RBP2.59□□□□□ -1.99
LIMA1-208ENST00000551691 MYCNOSP40205 109 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 CTRLP40313 264 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 MAGEA3P43357 314 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 BLVRAP53004 296 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 WNT4P56705 351 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 RPL23P62829 140 aaKnown RBP2.59□□□□□ -1.99
LIMA1-208ENST00000551691 LRRC75BQ2VPJ9 315 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 HHATQ5VTY9 493 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 FBXW12Q6X9E4 464 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 GRINAQ7Z429 371 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF429Q86V71 674 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 C20orf196Q8IYI0 205 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 OR5AS1Q8N127 324 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF738Q8NE65 137 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 SFXN5Q8TD22 340 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 DDIT4LQ96D03 193 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 FAM210BQ96KR6 192 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 SDF2Q99470 211 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 IFI27L2Q9H2X8 130 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 VPS29Q9UBQ0 182 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 GLS2Q9UI32 602 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 IGHV3OR15-7A0A075B7D8 119 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 TRAV8-6A0A0B4J262 113 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 PLAC8L1A1L4L8 177 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 C5orf49A4QMS7 147 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 F5H5P2 479 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 KRTAP4-16G5E9R7 235 aaPredicted RBP2.58□□□□□ -2
LIMA1-208ENST00000551691 SMLR1H3BR10 107 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 MANBAO00462 879 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 PLPP3O14495 311 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 RTL8CO15255 209 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 FABP7O15540 132 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 UBL3O95164 117 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 TFF1P04155 84 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 MLNP12872 115 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 CD24P25063 80 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 PSMB9P28065 219 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 MAGEA6P43360 314 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 POLR2HP52434 150 aaKnown RBP2.58□□□□□ -2
LIMA1-208ENST00000551691 UBE2G2P60604 165 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 PRKCDQ05655 676 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 DAZ2Q13117 558 aaKnown RBP2.58□□□□□ -2
LIMA1-208ENST00000551691 TPBGQ13641 420 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 C1DQ13901 141 aaKnown RBP2.58□□□□□ -2
LIMA1-208ENST00000551691 MPPED2Q15777 294 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 TBC1D28Q2M2D7 210 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 SMUG1Q53HV7 270 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 SPANXN3Q5MJ09 141 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 LDLRAD2Q5SZI1 272 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 FAM71E1Q6IPT2 247 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 Q6ZVH6 145 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 MRPL52Q86TS9 123 aaKnown RBP2.58□□□□□ -2
LIMA1-208ENST00000551691 C10orf107Q8IVU9 208 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 LRRC18Q8N456 261 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 SLC22A24Q8N4F4 322 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 LY6G5BQ8NDX9 201 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 OR5D16Q8NGK9 328 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 OR5AK3PQ8NH89 298 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 STAG3L4Q8TBR4 150 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 DCAKDQ8WVC6 231 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 CMBLQ96DG6 245 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 PAIP2Q9BPZ3 127 aaKnown RBP2.58□□□□□ -2
LIMA1-208ENST00000551691 PYGO2Q9BRQ0 406 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 TMED9Q9BVK6 235 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 BCL2L14Q9BZR8 327 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 METTL8Q9H825 291 aaKnown RBP2.58□□□□□ -2
LIMA1-208ENST00000551691 RPS10P5Q9NQ39 176 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 DAZ3Q9NR90 486 aaKnown RBP2.58□□□□□ -2
LIMA1-208ENST00000551691 PLSCR3Q9NRY6 295 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 C1orf109Q9NX04 203 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 ANXA10Q9UJ72 324 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 LINC00527Q9UJ94 153 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 RAB22AQ9UL26 194 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 PSG8Q9UQ74 426 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 ENPP4Q9Y6X5 453 aa2.58□□□□□ -2
LIMA1-208ENST00000551691 J3QT63 122 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 M0R2N4 97 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 CRXO43186 299 aaPredicted RBP2.57□□□□□ -2
LIMA1-208ENST00000551691 GATBO75879 557 aaKnown RBP2.57□□□□□ -2
LIMA1-208ENST00000551691 OXTP01178 125 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 C1QCP02747 245 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 SERPINE1P05121 402 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 S100A6P06703 90 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 MNAT1P51948 309 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 CDK5Q00535 292 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 RAB31Q13636 194 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 PMVKQ15126 192 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 ZNF141Q15928 474 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 TTC32Q5I0X7 151 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 PABPC1L2AQ5JQF8 200 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 RBM48Q5RL73 367 aaKnown RBP2.57□□□□□ -2
LIMA1-208ENST00000551691 LGALS9CQ6DKI2 356 aa2.57□□□□□ -2
LIMA1-208ENST00000551691 CEMP1Q6PRD7 247 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms