RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, human

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-229	ENST00000551261	SLC25A17	O43808	307 aa		11.43	□□□□□ -0.58
LETMD1-229	ENST00000551261	IGHV4-31	P0DP07	118 aa		11.43	□□□□□ -0.58
LETMD1-229	ENST00000551261	PAX9	P55771	341 aa		11.43	□□□□□ -0.58
LETMD1-229	ENST00000551261	PSG5	Q15238	335 aa		11.43	□□□□□ -0.58
LETMD1-229	ENST00000551261	ATP6V1F	Q16864	119 aa		11.43	□□□□□ -0.58
LETMD1-229	ENST00000551261	LDLRAD2	Q5SZI1	272 aa		11.43	□□□□□ -0.58
LETMD1-229	ENST00000551261	TMEM14EP	Q6UXP3	125 aa		11.43	□□□□□ -0.58
LETMD1-229	ENST00000551261	PPP1R27	Q86WC6	154 aa		11.43	□□□□□ -0.58
LETMD1-229	ENST00000551261	UBAC2	Q8NBM4	344 aa		11.43	□□□□□ -0.58
LETMD1-229	ENST00000551261	FBXL17	Q9UF56	701 aa		11.43	□□□□□ -0.58
LETMD1-229	ENST00000551261	IGSF23	A1L1A6	192 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	RRH	O14718	337 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	TMEM50A	O95807	157 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	TGFA	P01135	160 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	IGKV1D-33	P01593	117 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	IGKV1-33	P01594	117 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	CRYGB	P07316	175 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	SNRNP70	P08621	437 aa	Known RBP	11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	FBP1	P09467	338 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	IAPP	P10997	89 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	HTR2B	P41595	481 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	VDAC2	P45880	294 aa	Predicted RBP	11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	COMP	P49747	757 aa	Predicted RBP	11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	RAB11A	P62491	216 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	MMD	Q15546	238 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	PRSS8	Q16651	343 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	CYB5R2	Q6BCY4	276 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261		Q8N6K4	173 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	OR1S2	Q8NGQ3	325 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	ST8SIA2	Q92186	375 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	EAF1	Q96JC9	268 aa	Predicted RBP	11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	GGACT	Q9BVM4	153 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	MEGF9	Q9H1U4	602 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	HEYL	Q9NQ87	328 aa	Predicted RBP	11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	UBQLN2	Q9UHD9	624 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	PAIP2B	Q9ULR5	123 aa	Known RBP	11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	SIGLEC9	Q9Y336	463 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.42	□□□□□ -0.58	1e-7	■■■■□ 24
LETMD1-229	ENST00000551261	CRYBG3	Q68DQ2	2970 aa		11.42	□□□□□ -0.58
LETMD1-229	ENST00000551261	ABCA12	Q86UK0	2595 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	TACC2	O95359	2948 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	IGHV3-72	A0A0B4J1Y9	119 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	FAM24A	A6NFZ4	105 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	NXPH3	O95157	252 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	IFITM2	Q01629	132 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	HES1	Q14469	280 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	SPANXN5	Q5MJ07	72 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	BAP18	Q8IXM2	172 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	LRRC20	Q8TCA0	184 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	ATP5S	Q99766	215 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	NDUFA4L2	Q9NRX3	87 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	METTL1	Q9UBP6	276 aa	Known RBP	11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	FAM96B	Q9Y3D0	163 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	CENPE	Q02224	2701 aa		11.41	□□□□□ -0.58
LETMD1-229	ENST00000551261	TRAV3	A0A0B4J244	114 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	TEX50	A0A1B0GTY4	177 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	OR8U8	P0C7N1	319 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	TMEM11	P17152	192 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	SUB1	P53999	127 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	ERH	P84090	104 aa	Known RBP	11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	PRB3	Q04118	309 aa	Predicted RBP	11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	PLGLA	Q15195	96 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	C9orf139	Q6ZV77	190 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	PDZD9	Q8IXQ8	264 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	LILRB2	Q8N423	598 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	PIP4P2	Q8N4L2	257 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	ZNF680	Q8NEM1	530 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	SLC24A4	Q8NFF2	622 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	OR10P1	Q8NGE3	313 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	OR5C1	Q8NGR4	320 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	SCARB1	Q8WTV0	552 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	ZDHHC16	Q969W1	377 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	AJUBA	Q96IF1	538 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	PITPNC1	Q9UKF7	332 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	CREBBP	Q92793	2442 aa		11.4	□□□□□ -0.58
LETMD1-229	ENST00000551261	GCN1	Q92616	2671 aa	Known RBP	11.4	□□□□□ -0.59
LETMD1-229	ENST00000551261	APC	P25054	2843 aa		11.4	□□□□□ -0.59
LETMD1-229	ENST00000551261		A0A1W2PRD5	423 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261		A0A1W2PRF3	423 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261		A0A1W2PRM7	423 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	FNDC10	F2Z333	226 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261		H3BP45	60 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	SOX15	O60248	233 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	IFNA10	P01566	189 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	NPY1R	P25929	384 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	RPL27A	P46776	148 aa	Known RBP	11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	RAB14	P61106	215 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	NDUFA5	Q16718	116 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	C5orf64	Q2M2E5	130 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	BSX	Q3C1V8	233 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	HIST2H2BC	Q6DN03	193 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	C16orf82	Q7Z2V1	217 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	NANP	Q8TBE9	248 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	ARV1	Q9H2C2	271 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	CYTL1	Q9NRR1	136 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	UNC79	Q9P2D8	2635 aa		11.39	□□□□□ -0.59
LETMD1-229	ENST00000551261	ARHGAP32	A7KAX9	2087 aa		11.39	□□□□□ -0.59

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