RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 OR4K2Q8NGD2 314 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 GRPEL2Q8TAA5 225 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 LHFPL5Q8TAF8 219 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 PYDC1Q8WXC3 89 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 DGCR14Q96DF8 476 aaKnown RBP2.57□□□□□ -2
LIMA1-205ENST00000550592 RILPQ96NA2 401 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 TRNT1Q96Q11 434 aaKnown RBP2.57□□□□□ -2
LIMA1-205ENST00000550592 SLC22A4Q9H015 551 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 RAB1BQ9H0U4 201 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 OR51V1Q9H2C8 321 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 DHX35Q9H5Z1 703 aaKnown RBP2.57□□□□□ -2
LIMA1-205ENST00000550592 WDR55Q9H6Y2 383 aaPredicted RBP2.57□□□□□ -2
LIMA1-205ENST00000550592 TREM1Q9NP99 234 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 CYB5R1Q9UHQ9 305 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 GLS2Q9UI32 602 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 HEATR5BQ9P2D3 2071 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 A0A1W2PRG6 482 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 EVPLLA8MZ36 301 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 FAM25AB3EWG3 89 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 FAM25CB3EWG5 89 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 FAM25GB3EWG6 89 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 KPNA4O00629 521 aaPredicted RBP2.56□□□□□ -2
LIMA1-205ENST00000550592 DHFRP00374 187 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 APOA1P02647 267 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 TFPTP0C1Z6 253 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 PIRTP0C851 137 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 CMPK1P30085 196 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 GPR4P46093 362 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 AP2S1P53680 142 aaPredicted RBP2.56□□□□□ -2
LIMA1-205ENST00000550592 RBX1P62877 108 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 GLO1Q04760 184 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 STX5Q13190 355 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 PMS2P3Q13401 168 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 PMVKQ15126 192 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 ZNF791Q3KP31 576 aaPredicted RBP2.56□□□□□ -2
LIMA1-205ENST00000550592 LIN52Q52LA3 116 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 PDPNQ86YL7 162 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 LRRC8AQ8IWT6 810 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 ATPAF2Q8N5M1 289 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 LINC00337Q8N6G1 96 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 OR6K3Q8NGY3 331 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 RNASE11Q8TAA1 199 aaKnown RBP2.56□□□□□ -2
LIMA1-205ENST00000550592 ZNF420Q8TAQ5 688 aaPredicted RBP2.56□□□□□ -2
LIMA1-205ENST00000550592 LGALS14Q8TCE9 139 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 ZNF721Q8TF20 911 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 NAT14Q8WUY8 206 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 DNAJC9Q8WXX5 260 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 MUCL1Q96DR8 90 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 PPP1R36Q96LQ0 422 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 QKIQ96PU8 341 aaKnown RBP eCLIP2.56□□□□□ -2
LIMA1-205ENST00000550592 DERL3Q96Q80 235 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 METTL26Q96S19 204 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 RTBDNQ9BSG5 229 aaPredicted RBP2.56□□□□□ -2
LIMA1-205ENST00000550592 SND1-IT1Q9HBX3 110 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 PROK2Q9HC23 129 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 C19orf12Q9NSK7 152 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 RBM22Q9NW64 420 aaKnown RBP eCLIP2.56□□□□□ -2
LIMA1-205ENST00000550592 CMTM6Q9NX76 183 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 SLC22A14Q9Y267 594 aa2.56□□□□□ -2
LIMA1-205ENST00000550592 LYSTQ99698 3801 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 OR6C70A6NIJ9 312 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 F8W036 122 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 CCRL2O00421 344 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 TOR1AO14656 332 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 TP53I11O14683 189 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 CST8O60676 142 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 CBR3O75828 277 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 SC5DO75845 299 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 RPP14O95059 124 aaKnown RBP2.55□□□□□ -2
LIMA1-205ENST00000550592 FAM107AO95990 144 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 IGHV1-46P01743 117 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 IGLV7-43P04211 117 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 FABP1P07148 127 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 CCNOP22674 350 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 TGM4P49221 684 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 SERPINB9P50453 376 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 CEBPGP53567 150 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 CTBP2P56545 445 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 OR12D2P58182 307 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 SPCS3P61009 180 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 NAA20P61599 178 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 SNRPD2P62316 118 aaKnown RBP2.55□□□□□ -2
LIMA1-205ENST00000550592 SKP1P63208 163 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 BTG2P78543 158 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 EMX1Q04741 257 aaPredicted RBP2.55□□□□□ -2
LIMA1-205ENST00000550592 ATP5G2Q06055 141 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 MEF2CQ06413 473 aaPredicted RBP2.55□□□□□ -2
LIMA1-205ENST00000550592 SMCO1Q147U7 214 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 KCNJ8Q15842 424 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 FAHD1Q6P587 224 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 CLEC19AQ6UXS0 136 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 PLCZ1Q86YW0 608 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 CLDND2Q8NHS1 167 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 DTD1Q8TEA8 209 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 POP5Q969H6 163 aaKnown RBP2.55□□□□□ -2
LIMA1-205ENST00000550592 BORCS5Q969J3 196 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 SMIM8Q96KF7 97 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 MRPL20Q9BYC9 149 aaKnown RBP2.55□□□□□ -2
LIMA1-205ENST00000550592 POTEKPQ9BYX7 375 aa2.55□□□□□ -2
LIMA1-205ENST00000550592 SLC38A1Q9H2H9 487 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms