RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 SPINK9Q5DT21 86 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 C9orf152Q5JTZ5 239 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 C10orf55Q5SWW7 151 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 C16orf82Q7Z2V1 217 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 MMD2Q8IY49 270 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 TMEM86BQ8N661 226 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 ZBTB8BQ8NAP8 495 aaPredicted RBP8.17□□□□□ -1.1
RAB5C-207ENST00000550504 C2orf50Q96LR7 162 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 SPIN2AQ99865 258 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 SPIN2BQ9BPZ2 258 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 HSPB9Q9BQS6 159 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 HINT2Q9BX68 163 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.17□□□□□ -1.1
RAB5C-207ENST00000550504 PRNDQ9UKY0 176 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 OR51B2Q9Y5P1 312 aa8.17□□□□□ -1.1
RAB5C-207ENST00000550504 TEX50A0A1B0GTY4 177 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 M0QZK8 103 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 ST8SIA3O43173 380 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 FGF16O43320 207 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 ACTL6BO94805 426 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 CNIH1O95406 144 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 BLCAPP62952 87 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 CX3CL1P78423 397 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 CD83Q01151 205 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 ATRQ13535 2644 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 FOXRED2Q8IWF2 684 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 OR4D5Q8NGN0 318 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 GRPEL2Q8TAA5 225 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 ABHD5Q8WTS1 349 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 CHAC2Q8WUX2 184 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 JMJD8Q96S16 334 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 ZNF436Q9C0F3 470 aaPredicted RBP8.16□□□□□ -1.1
RAB5C-207ENST00000550504 COMMD5Q9GZQ3 224 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 TMEM14BQ9NUH8 114 aa8.16□□□□□ -1.1
RAB5C-207ENST00000550504 FOXA2Q9Y261 457 aaPredicted RBP8.16□□□□□ -1.1
RAB5C-207ENST00000550504 MXRA5Q9NR99 2828 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 IGHV7-81A0A0B4J1V7 117 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 LINC01548A6NM66 108 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 TCF21O43680 179 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 PITX3O75364 302 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 IFNA17P01571 189 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 HLA-DRB1P01911 266 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 APELAP0DMC3 54 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 SLC25A6P12236 298 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 RPL27AP46776 148 aaKnown RBP8.15□□□□□ -1.1
RAB5C-207ENST00000550504 COMPP49747 757 aaPredicted RBP8.15□□□□□ -1.1
RAB5C-207ENST00000550504 S100A10P60903 97 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 UBA52P62987 128 aaKnown RBP8.15□□□□□ -1.1
RAB5C-207ENST00000550504 SSBP2P81877 361 aaPredicted RBP8.15□□□□□ -1.1
RAB5C-207ENST00000550504 NDPQ00604 133 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 SRSF2Q01130 221 aaKnown RBP8.15□□□□□ -1.1
RAB5C-207ENST00000550504 FXYD3Q14802 87 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 LRRC37A5PQ49AS3 106 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 CXorf66Q5JRM2 361 aaPredicted RBP8.15□□□□□ -1.1
RAB5C-207ENST00000550504 Q6ZS46 218 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 SRSF12Q8WXF0 261 aaKnown RBP8.15□□□□□ -1.1
RAB5C-207ENST00000550504 TAF15Q92804 592 aaKnown RBP eCLIP8.15□□□□□ -1.1
RAB5C-207ENST00000550504 FYTTD1Q96QD9 318 aaKnown RBP8.15□□□□□ -1.1
RAB5C-207ENST00000550504 FAM103A1Q9BTL3 118 aaKnown RBP8.15□□□□□ -1.1
RAB5C-207ENST00000550504 MAGT1Q9H0U3 335 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 PARP11Q9NR21 331 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 COA4Q9NYJ1 87 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 FKBP11Q9NYL4 201 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 LSM5Q9Y4Y9 91 aaKnown RBP8.15□□□□□ -1.1
RAB5C-207ENST00000550504 SVEP1Q4LDE5 3571 aa8.15□□□□□ -1.1
RAB5C-207ENST00000550504 FAM181BA6NEQ2 426 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 MSGN1A6NI15 193 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 CGB1A6NKQ9 187 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 CEBPZOSA8MTT3 80 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 E7EUB6 86 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 CLDN34H7C241 214 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 TRIM77I1YAP6 450 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 MBPP02686 304 aaPredicted RBP8.14□□□□□ -1.11
RAB5C-207ENST00000550504 RNASE1P07998 156 aaKnown RBP8.14□□□□□ -1.11
RAB5C-207ENST00000550504 MAS1LP35410 378 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 NKX2-1P43699 371 aaPredicted RBP8.14□□□□□ -1.11
RAB5C-207ENST00000550504 HSPE1P61604 102 aaKnown RBP8.14□□□□□ -1.11
RAB5C-207ENST00000550504 TNFRSF9Q07011 255 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 ARSJQ5FYB0 599 aaPredicted RBP8.14□□□□□ -1.11
RAB5C-207ENST00000550504 C11orf87Q6NUJ2 197 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 ZNF562Q6V9R5 426 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 SLC35E3Q7Z769 313 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 ZNF429Q86V71 674 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 OR1L8Q8NGR8 309 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 OR5B3Q8NH48 314 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 ARPC1AQ92747 370 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 NMES1Q9C002 83 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 NPFFR1Q9GZQ6 430 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 RBKSQ9H477 322 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 HSPB7Q9UBY9 170 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 ZNF257Q9Y2Q1 563 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 FBXO7Q9Y3I1 522 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 PLXNB1O43157 2135 aa8.14□□□□□ -1.11
RAB5C-207ENST00000550504 TET2Q6N021 2002 aaPredicted RBP8.13□□□□□ -1.11
RAB5C-207ENST00000550504 TNCP24821 2201 aa8.13□□□□□ -1.11
RAB5C-207ENST00000550504 ANK3Q12955 4377 aaKnown RBP8.13□□□□□ -1.11
RAB5C-207ENST00000550504 A0A1B0GW64 132 aa8.13□□□□□ -1.11
RAB5C-207ENST00000550504 WRBO00258 174 aa8.13□□□□□ -1.11
RAB5C-207ENST00000550504 ATP6V0E1O15342 81 aa8.13□□□□□ -1.11
RAB5C-207ENST00000550504 SSSCA1O60232 199 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms