RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 FOXA2Q9Y261 457 aaPredicted RBP8.7□□□□□ -1.02
RAB5B-208ENST00000550283 PRELID3BQ9Y3B1 194 aa8.7□□□□□ -1.02
RAB5B-208ENST00000550283 PRKDCP78527 4128 aaKnown RBP8.69□□□□□ -1.02
RAB5B-208ENST00000550283 NOTCH3Q9UM47 2321 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 C7orf66A4D0T2 115 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 NUDT19A8MXV4 375 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 I3L521 148 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 RAB3DO95716 219 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 CDX1P47902 265 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-208ENST00000550283 TSPAN5P62079 268 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 VMA21Q3ZAQ7 101 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 ACTBL2Q562R1 376 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 RNASE10Q5GAN6 216 aaKnown RBP8.69□□□□□ -1.02
RAB5B-208ENST00000550283 CXorf66Q5JRM2 361 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-208ENST00000550283 SAMD5Q5TGI4 173 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 OR4A47Q6IF82 309 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 STEAP1BQ6NZ63 245 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 TBC1D26Q86UD7 250 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 COMMD1Q8N668 190 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 ZBTB34Q8NCN2 500 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 WFDC9Q8NEX5 89 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 OR4F17Q8NGA8 305 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 OR4C16Q8NGL9 310 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 TMEM167AQ8TBQ9 72 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 SRSF12Q8WXF0 261 aaKnown RBP8.69□□□□□ -1.02
RAB5B-208ENST00000550283 DEDD2Q8WXF8 326 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 RHOVQ96L33 236 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 OR4F4Q96R69 305 aa8.69□□□□□ -1.02
RAB5B-208ENST00000550283 RANGRFQ9HD47 186 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-208ENST00000550283 DBX1A6NMT0 343 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 GPR31O00270 319 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 PRAF2O60831 178 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 KBTBD11O94819 623 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 CNIH1O95406 144 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 IGHV3-11P01762 117 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 AKAIN1P0CW23 69 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 LPAR6P43657 344 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 NKX2-5P52952 324 aaPredicted RBP8.68□□□□□ -1.02
RAB5B-208ENST00000550283 UCP3P55916 312 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 IZUMO4Q1ZYL8 232 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 BEAN1Q3B7T3 259 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 AKIRIN2Q53H80 203 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 TCTE3Q8IZS6 198 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 OR13C8Q8NGS7 320 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 MARCH1Q8TCQ1 289 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 ZNF486Q96H40 463 aaPredicted RBP8.68□□□□□ -1.02
RAB5B-208ENST00000550283 ZFP57Q9NU63 452 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 PAIP2BQ9ULR5 123 aaKnown RBP8.68□□□□□ -1.02
RAB5B-208ENST00000550283 NSG2Q9Y328 171 aa8.68□□□□□ -1.02
RAB5B-208ENST00000550283 CCL24O00175 119 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 RBFOX2O43251 390 aaKnown RBP eCLIP8.67□□□□□ -1.02
RAB5B-208ENST00000550283 OR2A4O95047 310 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 TRBV12-3P01733 135 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 OR9G9P0C7N8 305 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 AREGP15514 252 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 F2RP25116 425 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 G6PCP35575 357 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 TAS2R19P59542 299 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 DEFA6Q01524 100 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 POU2AF1Q16633 256 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 SCGB2B2Q4G0G5 96 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 ADAD2Q8NCV1 583 aaKnown RBP8.67□□□□□ -1.02
RAB5B-208ENST00000550283 C4orf3Q8WVX3 66 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 OR2A7Q96R45 310 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 TP53RKQ96S44 253 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 SLC2A9Q9NRM0 540 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 TMEM140Q9NV12 185 aa8.67□□□□□ -1.02
RAB5B-208ENST00000550283 IGHV4OR15-8A0A075B7B6 117 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 A0A087WW49 117 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 UPK2O00526 184 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 SSNA1O43805 119 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 NDUFB6O95139 128 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 HPRT1P00492 218 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 PF4P02776 101 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 REG1AP05451 166 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 PGAM2P15259 253 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 KIR2DS2P43631 304 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 KRTAP10-11P60412 298 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 FHL3Q13643 280 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 FCN2Q15485 313 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 SP6Q3SY56 376 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 NOXA1Q86UR1 476 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 ARRDC1Q8N5I2 433 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 OR10W1Q8NGF6 305 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 OR51S1Q8NGJ8 323 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 UBE2E2Q96LR5 201 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 FYTTD1Q96QD9 318 aaKnown RBP8.66□□□□□ -1.02
RAB5B-208ENST00000550283 RTBDNQ9BSG5 229 aaPredicted RBP8.66□□□□□ -1.02
RAB5B-208ENST00000550283 GON7Q9BXV9 100 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 GPN1Q9HCN4 374 aaPredicted RBP8.66□□□□□ -1.02
RAB5B-208ENST00000550283 PRR13Q9NZ81 148 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 DMRT1Q9Y5R6 373 aa8.66□□□□□ -1.02
RAB5B-208ENST00000550283 A0A0G2JRQ6 117 aa8.65□□□□□ -1.02
RAB5B-208ENST00000550283 MPPED1O15442 326 aa8.65□□□□□ -1.02
RAB5B-208ENST00000550283 KRASP01116 189 aa8.65□□□□□ -1.02
RAB5B-208ENST00000550283 IGKV1-5P01602 117 aa8.65□□□□□ -1.02
RAB5B-208ENST00000550283 TRGV3P03979 118 aa8.65□□□□□ -1.02
RAB5B-208ENST00000550283 IFNA6P05013 189 aa8.65□□□□□ -1.02
RAB5B-208ENST00000550283 TBPP20226 339 aa8.65□□□□□ -1.02
RAB5B-208ENST00000550283 HOXD3P31249 432 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms