RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 NKX6-3A6NJ46 265 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 C11orf94C9JXX5 98 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HIST1H2BKO60814 126 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 CLN5O75503 358 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HIST1H2BJP06899 126 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 THBDP07204 575 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 NDUFB7P17568 137 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HIST1H2BOP23527 126 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HIST1H2BBP33778 126 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HIST1H2BDP58876 126 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HIST1H2BCP62807 126 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HIST2H2BEQ16778 126 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.73□□□□□ -0.37
BRF1-212ENST00000547562 SLC24A4Q8NFF2 622 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HIST1H2BHQ93079 126 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HIST1H2BNQ99877 126 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HIST1H2BMQ99879 126 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 PATZ1Q9HBE1 687 aaKnown RBP12.73□□□□□ -0.37
BRF1-212ENST00000547562 JKAMPQ9P055 326 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 DOK5Q9P104 306 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 SH3BGRL2Q9UJC5 107 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 LSM4Q9Y4Z0 139 aaKnown RBP12.73□□□□□ -0.37
BRF1-212ENST00000547562 PXMP4Q9Y6I8 212 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 NPY1RP25929 384 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 GFRALQ6UXV0 394 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 ZCCHC24Q8N2G6 241 aaKnown RBP12.72□□□□□ -0.37
BRF1-212ENST00000547562 NPVFQ9HCQ7 196 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 ENY2Q9NPA8 101 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 CT45A6P0DMU7 189 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 CT45A5P0DMU8 189 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 CT45A7P0DMV0 189 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 NDUFA6P56556 154 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 MIC13Q5XKP0 118 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 C16orf82Q7Z2V1 217 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 NANPQ8TBE9 248 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 C1orf159Q96HA4 380 aa12.72□□□□□ -0.37
BRF1-212ENST00000547562 SLC25A10Q9UBX3 287 aaPredicted RBP12.72□□□□□ -0.37
BRF1-212ENST00000547562 PTPRZ1P23471 2315 aaPredicted RBP12.72□□□□□ -0.37
BRF1-212ENST00000547562 SMG1Q96Q15 3661 aaKnown RBP12.72□□□□□ -0.37
BRF1-212ENST00000547562 TGOLN2O43493 480 aa12.71□□□□□ -0.37
BRF1-212ENST00000547562 IL6RP08887 468 aaPredicted RBP12.71□□□□□ -0.37
BRF1-212ENST00000547562 S100A12P80511 92 aa12.71□□□□□ -0.37
BRF1-212ENST00000547562 ARSJQ5FYB0 599 aaPredicted RBP12.71□□□□□ -0.37
BRF1-212ENST00000547562 PRNDQ9UKY0 176 aa12.71□□□□□ -0.37
BRF1-212ENST00000547562 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
BRF1-212ENST00000547562 OR51B2Q9Y5P1 312 aa12.71□□□□□ -0.37
BRF1-212ENST00000547562 RTL8BQ17RB0 113 aa12.71□□□□□ -0.38
BRF1-212ENST00000547562 GAL3ST2Q9H3Q3 398 aa12.71□□□□□ -0.38
BRF1-212ENST00000547562 KCNIP2Q9NS61 270 aa12.71□□□□□ -0.38
BRF1-212ENST00000547562 ZNRD1Q9P1U0 126 aa12.71□□□□□ -0.38
BRF1-212ENST00000547562 PDE6DO43924 150 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 CA2P00918 260 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 IGKV1-16P04430 117 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 MYOD1P15172 320 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 NPPCP23582 126 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 CDX1P47902 265 aaPredicted RBP12.7□□□□□ -0.38
BRF1-212ENST00000547562 RPL31P62899 125 aaKnown RBP12.7□□□□□ -0.38
BRF1-212ENST00000547562 MEF2CQ06413 473 aaPredicted RBP12.7□□□□□ -0.38
BRF1-212ENST00000547562 OR10A7Q8NGE5 316 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 SAP30LQ9HAJ7 183 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 SLC35D1Q9NTN3 355 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 ZNF835Q9Y2P0 537 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 ZNF257Q9Y2Q1 563 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 PKDREJQ9NTG1 2253 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 VENTXO95231 258 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 PFN1P07737 140 aaKnown RBP12.7□□□□□ -0.38
BRF1-212ENST00000547562 UBE2G2P60604 165 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 TEPPQ6URK8 271 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 SSX8Q7RTT4 187 aa12.7□□□□□ -0.38
BRF1-212ENST00000547562 UPK2O00526 184 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 STAG3L2P0CL84 134 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 STAG3L3P0CL85 134 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 ARL14EPLP0DKL9 152 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 CST9LP1Q5W188 147 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 SPNS3Q6ZMD2 512 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 OR51G1Q8NGK1 321 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 ABHD5Q8WTS1 349 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 SSMEM1Q8WWF3 244 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 HINT2Q9BX68 163 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 SRRM4A7MD48 611 aaKnown RBP12.69□□□□□ -0.38
BRF1-212ENST00000547562 LINC00587B1AMM8 73 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 H7BYZ3 331 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 J3QR06 171 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 FCN3O75636 299 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 TRGC1P0CF51 173 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 ATP5G3P48201 142 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 PRCDQ00LT1 54 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 ZNF833PQ6ZTB9 187 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 FRZBQ92765 325 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 PLEKHA3Q9HB20 300 aa12.69□□□□□ -0.38
BRF1-212ENST00000547562 PPIAL4EA0A075B759 164 aa12.68□□□□□ -0.38
BRF1-212ENST00000547562 IFITM10A6NMD0 228 aa12.68□□□□□ -0.38
BRF1-212ENST00000547562 PPIAL4DF5H284 164 aa12.68□□□□□ -0.38
BRF1-212ENST00000547562 TMEM178BH3BS89 294 aa12.68□□□□□ -0.38
BRF1-212ENST00000547562 PHOX2AO14813 284 aa12.68□□□□□ -0.38
BRF1-212ENST00000547562 CXorf1O96002 111 aa12.68□□□□□ -0.38
BRF1-212ENST00000547562 PPIAL4FP0DN26 164 aa12.68□□□□□ -0.38
BRF1-212ENST00000547562 GNB1P62873 340 aa12.68□□□□□ -0.38
BRF1-212ENST00000547562 SPACA3Q8IXA5 215 aa12.68□□□□□ -0.38
BRF1-212ENST00000547562 ANAPC16Q96DE5 110 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms