RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 HLA-DRB5Q30154 266 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 TMEM144Q7Z5S9 345 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 MOB3BQ86TA1 216 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 ZNRD1Q9P1U0 126 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 GRIFINA4D1Z8 144 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 A8MWP6 167 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 ACTL6BO94805 426 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 CD33P20138 364 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 SSX2Q16385 188 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 SEM1Q6ZVN7 128 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 RPRMLQ8N4K4 120 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 ITLN1Q8WWA0 313 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 TMEM18Q96B42 140 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 SARAFQ96BY9 339 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 IMMP2LQ96T52 175 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 ELOVL5Q9NYP7 299 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 SLC25A15Q9Y619 301 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 CACNA1GO43497 2377 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 CEP250Q9BV73 2442 aa13.01□□□□□ -0.33
LDLR-204ENST00000545707 SAA2-SAA4A0A096LPE2 208 aa13□□□□□ -0.33
LDLR-204ENST00000545707 MDFIC2A0A1B0GVS7 189 aa13□□□□□ -0.33
LDLR-204ENST00000545707 AHRRA9YTQ3 701 aa13□□□□□ -0.33
LDLR-204ENST00000545707 MPDU1O75352 247 aa13□□□□□ -0.33
LDLR-204ENST00000545707 CXorf1O96002 111 aa13□□□□□ -0.33
LDLR-204ENST00000545707 SAA2P0DJI9 122 aaPredicted RBP13□□□□□ -0.33
LDLR-204ENST00000545707 NDUFB7P17568 137 aa13□□□□□ -0.33
LDLR-204ENST00000545707 GNG10P50151 68 aa13□□□□□ -0.33
LDLR-204ENST00000545707 EFNB3Q15768 340 aa13□□□□□ -0.33
LDLR-204ENST00000545707 C17orf58Q2M2W7 97 aa13□□□□□ -0.33
LDLR-204ENST00000545707 OR4A47Q6IF82 309 aa13□□□□□ -0.33
LDLR-204ENST00000545707 DMRTC2Q8IXT2 367 aaPredicted RBP13□□□□□ -0.33
LDLR-204ENST00000545707 STPG3Q8N7X2 389 aa13□□□□□ -0.33
LDLR-204ENST00000545707 DDB2Q92466 427 aa13□□□□□ -0.33
LDLR-204ENST00000545707 MISP3Q96FF7 219 aa13□□□□□ -0.33
LDLR-204ENST00000545707 NPVFQ9HCQ7 196 aa13□□□□□ -0.33
LDLR-204ENST00000545707 F2RL2O00254 374 aa13□□□□□ -0.33
LDLR-204ENST00000545707 CA2P00918 260 aa13□□□□□ -0.33
LDLR-204ENST00000545707 CGAP01215 116 aa13□□□□□ -0.33
LDLR-204ENST00000545707 FRMD6-AS1P0C7T7 363 aa13□□□□□ -0.33
LDLR-204ENST00000545707 IGFBP2P18065 325 aa13□□□□□ -0.33
LDLR-204ENST00000545707 RPL31P62899 125 aaKnown RBP13□□□□□ -0.33
LDLR-204ENST00000545707 LCN2P80188 198 aa13□□□□□ -0.33
LDLR-204ENST00000545707 LYG1Q8N1E2 194 aa13□□□□□ -0.33
LDLR-204ENST00000545707 OR52E5Q8NH55 327 aa13□□□□□ -0.33
LDLR-204ENST00000545707 LSM4Q9Y4Z0 139 aaKnown RBP13□□□□□ -0.33
LDLR-204ENST00000545707 TTC28Q96AY4 2481 aa13□□□□□ -0.33
LDLR-204ENST00000545707 SPAARA0A1B0GVQ0 90 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 K7EN84 100 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 GCHFRP30047 84 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 TMPRSS3P57727 454 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 PAX5Q02548 391 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 GBGT1Q8N5D6 347 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 OR4P4Q8NGL7 312 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 SNRNP40Q96DI7 357 aaKnown RBP12.99□□□□□ -0.33
LDLR-204ENST00000545707 LOXL4Q96JB6 756 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 DMXL2Q8TDJ6 3036 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 TNCP24821 2201 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 TRAV17A0A0B4J275 112 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 FAM90A9PA6NNJ1 464 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 C15orf61A6NNL5 157 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 GCGP01275 180 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 PAX1P15863 534 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 GATA2P23769 480 aaPredicted RBP12.99□□□□□ -0.33
LDLR-204ENST00000545707 NPY1RP25929 384 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 ADMP35318 185 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 TIMP3P35625 211 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 TMEM249Q2WGJ8 235 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 DEFB109BQ30KR1 87 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 PPP1R35Q8TAP8 253 aa12.99□□□□□ -0.33
LDLR-204ENST00000545707 PLCE1Q9P212 2302 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 MKRN2OSH3BPM6 223 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 MMP23AO75900 390 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 CD99P14209 185 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 CBLN1P23435 193 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 FOXL1Q12952 345 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 TEX38Q6PEX7 206 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 TEPPQ6URK8 271 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 SLC24A4Q8NFF2 622 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 OR4S2Q8NH73 311 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 DSCAMO60469 2012 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 A0A1B0GWJ7 208 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 SCGB1D1O95968 90 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 OR5I1Q13606 314 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 CR1LQ2VPA4 569 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 MIR17HGQ75NE6 70 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 OR10G8Q8NGN5 311 aa12.98□□□□□ -0.33
LDLR-204ENST00000545707 ROS1P08922 2347 aa12.97□□□□□ -0.33
LDLR-204ENST00000545707 KALRNO60229 2985 aa12.97□□□□□ -0.33
LDLR-204ENST00000545707 CGB3P0DN86 165 aa12.97□□□□□ -0.33
LDLR-204ENST00000545707 CGB7P0DN87 165 aa12.97□□□□□ -0.33
LDLR-204ENST00000545707 USF2Q15853 346 aaPredicted RBP12.97□□□□□ -0.33
LDLR-204ENST00000545707 MLANAQ16655 118 aa12.97□□□□□ -0.33
LDLR-204ENST00000545707 ZNF474Q6S9Z5 364 aaPredicted RBP12.97□□□□□ -0.33
LDLR-204ENST00000545707 DEFB124Q8NES8 71 aa12.97□□□□□ -0.33
LDLR-204ENST00000545707 TUBG2Q9NRH3 451 aa12.97□□□□□ -0.33
LDLR-204ENST00000545707 DCAF16Q9NXF7 216 aa12.97□□□□□ -0.33
LDLR-204ENST00000545707 IDI2-AS1Q9NZ38 188 aa12.97□□□□□ -0.33
LDLR-204ENST00000545707 HSPE1P61604 102 aaKnown RBP12.97□□□□□ -0.33
LDLR-204ENST00000545707 MRPS11P82912 194 aaKnown RBP12.97□□□□□ -0.33
LDLR-204ENST00000545707 MZT1Q08AG7 82 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms