RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 OR5B3Q8NH48 314 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 OR4A16Q8NH70 328 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 RNASE11Q8TAA1 199 aaKnown RBP4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 GPX8Q8TED1 209 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 DIRAS2Q96HU8 199 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 FYTTD1Q96QD9 318 aaKnown RBP4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 OR5B12Q96R08 314 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 ATP6V0BQ99437 205 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 PRRT1Q99946 306 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 RSRP1Q9BUV0 290 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 QTRT1Q9BXR0 403 aaKnown RBP4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 KLK15Q9H2R5 256 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 ENY2Q9NPA8 101 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 CCL28Q9NRJ3 127 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 CCDC59Q9P031 241 aaKnown RBP4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 COPZ2Q9P299 210 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 EXTL2Q9UBQ6 330 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 SCP2D1Q9UJQ7 156 aa4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 ELF5Q9UKW6 265 aaPredicted RBP4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 C14orf166Q9Y224 244 aaKnown RBP4.35□□□□□ -1.71
CLSTN3-215ENST00000544584 SORL1Q92673 2214 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 ANKRD34BA5PLL1 514 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 GABARAPH6UMI1 98 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 HPGDSO60760 199 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 GGCTO75223 188 aaKnown RBP4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 PGLYRP1O75594 196 aaPredicted RBP4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 IGHV3-11P01762 117 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 RLN1P04808 185 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 EIF4EP06730 217 aaKnown RBP4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 ZNF735P0CB33 412 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 TRAPPC2P0DI81 140 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 TRAPPC2BP0DI82 140 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 EGR2P11161 476 aaPredicted RBP4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 ANXA3P12429 323 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 MYOD1P15172 320 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 ELK1P19419 428 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 PSMB6P28072 239 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 GNRHRP30968 328 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 ERHP84090 104 aaKnown RBP4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 NDPQ00604 133 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 PJVKQ0ZLH3 352 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 KIAA0141Q14154 515 aaPredicted RBP4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 SURF2Q15527 256 aaPredicted RBP4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 CTF1Q16619 201 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 POU2AF1Q16633 256 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 C15orf32Q32M92 178 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 ANKRD55Q3KP44 614 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 C19orf54Q5BKX5 351 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 ZNF343Q6P1L6 599 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 ACSM6Q6P461 480 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 SPSB3Q6PJ21 355 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 SSX9Q7RTT3 188 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 NOXA1Q86UR1 476 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 SGPP2Q8IWX5 399 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 Q8N402 240 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 OR9G4Q8NGQ1 327 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 TERB2Q8NHR7 220 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 DEDD2Q8WXF8 326 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 DCUN1D4Q92564 292 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 LSM10Q969L4 123 aaKnown RBP4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 RRNAD1Q96FB5 475 aaKnown RBP4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 DUX3Q96PT4 197 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 C6orf62Q9GZU0 229 aaPredicted RBP4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 ZMAT4Q9H898 229 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 GNB4Q9HAV0 340 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 TMEM140Q9NV12 185 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 SIGLEC8Q9NYZ4 499 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 TECRQ9NZ01 308 aaKnown RBP4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 MTFP1Q9UDX5 166 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 ANAPC10Q9UM13 185 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 KCNIP3Q9Y2W7 256 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 SMAD5-AS1Q9Y6J3 95 aa4.34□□□□□ -1.71
CLSTN3-215ENST00000544584 TENM2Q9NT68 2774 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 IGHV4OR15-8A0A075B7B6 117 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 A0A087WW49 117 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 TRBV9A0A0B4J1U6 114 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 TEX13DA0A0J9YY54 714 aaPredicted RBP4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 UPK2O00526 184 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 CTDSPLO15194 276 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 RAB3DO95716 219 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 KRASP01116 189 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 CD5P06127 495 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 CRYGCP07315 174 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 AKAIN1P0CW23 69 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 ARL3P36405 182 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 TGFBR1P36897 503 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 SNCAP37840 140 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 LPAR6P43657 344 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 ALDH3B2P48448 385 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 INPP1P49441 399 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 AKR1C2P52895 323 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 RND3P61587 244 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 SRPXP78539 464 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 RELQ04864 619 aaPredicted RBP4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 EXOSC2Q13868 293 aaKnown RBP4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 KLF5Q13887 457 aaPredicted RBP4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 TRIM16LQ309B1 348 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 SCGB2B2Q4G0G5 96 aa4.33□□□□□ -1.72
CLSTN3-215ENST00000544584 SPANXN2Q5MJ10 180 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms