RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 LDOC1O95751 146 aaPredicted RBP0.73□□□□□ -2.29
YBX3-214ENST00000544501 FADS2O95864 444 aaKnown RBP0.73□□□□□ -2.29
YBX3-214ENST00000544501 APOA1P02647 267 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 ARL14EPLP0DKL9 152 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 GZMBP10144 247 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 NQO2P16083 231 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 RCVRNP35243 200 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 GABARAPL2P60520 117 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 BSPH1Q075Z2 132 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 SRSF6Q13247 344 aaKnown RBP0.73□□□□□ -2.29
YBX3-214ENST00000544501 FLOT2Q14254 428 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 PDK2Q15119 407 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 MAPK14Q16539 360 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 FAM229BQ4G0N7 80 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 VN1R4Q7Z5H5 301 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 TRIML2Q8N7C3 387 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 OR11L1Q8NGX0 322 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 OR5K1Q8NHB7 308 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 RORBQ92753 470 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 CCDC124Q96CT7 223 aaKnown RBP0.73□□□□□ -2.29
YBX3-214ENST00000544501 Q9BRP9 147 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 MND1Q9BWT6 205 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 C1QTNF6Q9BXI9 259 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 KRTAP4-1Q9BYQ7 146 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 DMAC2Q9NW81 257 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 PSMD13Q9UNM6 376 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 ALG5Q9Y673 324 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 KNL1Q8NG31 2342 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 LCTP09848 1927 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 ABCA4P78363 2273 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 ATAD5Q96QE3 1844 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 STARD9Q9P2P6 4700 aa0.73□□□□□ -2.29
YBX3-214ENST00000544501 SIPA1L3O60292 1781 aaPredicted RBP0.73□□□□□ -2.29
YBX3-214ENST00000544501 SYNE2Q8WXH0 6885 aaKnown RBP0.72□□□□□ -2.29
YBX3-214ENST00000544501 YLPM1P49750 1951 aaKnown RBP0.72□□□□□ -2.29
YBX3-214ENST00000544501 ZNF638Q14966 1978 aaKnown RBP0.72□□□□□ -2.29
YBX3-214ENST00000544501 PLXNA4Q9HCM2 1894 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 SIGLEC16A6NMB1 481 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 EFCAB9A8MZ26 197 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 GPR171O14626 319 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 SGCEO43556 437 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 UGT2B11O75310 529 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 SNAP29O95721 258 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 CD36P16671 472 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 GADD45AP24522 165 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 OR2B6P58173 313 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 SLC35A2P78381 396 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 GTF2BQ00403 316 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 HES1Q14469 280 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 PDGFRLQ15198 375 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 TMEM249Q2WGJ8 235 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 FBXO48Q5FWF7 155 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 OR10J3Q5JRS4 329 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 DEFB119Q8N690 84 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 OR11H1Q8NG94 326 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 OR4P4Q8NGL7 312 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 OR4X1Q8NH49 305 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 OR10A6Q8NH74 314 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 ANGPTL6Q8NI99 470 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 SUN5Q8TC36 379 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 C16orf78Q8WTQ4 265 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 PPWD1Q96BP3 646 aaKnown RBP0.72□□□□□ -2.29
YBX3-214ENST00000544501 SIKE1Q9BRV8 207 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 ZNF471Q9BX82 626 aaPredicted RBP0.72□□□□□ -2.29
YBX3-214ENST00000544501 UGT2B28Q9BY64 529 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 CHST5Q9GZS9 411 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 GTSF1LQ9H1H1 148 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 TMEM216Q9P0N5 145 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 MRM2Q9UI43 246 aaKnown RBP0.72□□□□□ -2.29
YBX3-214ENST00000544501 STK38LQ9Y2H1 464 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 MINOS1-NBL1R4GNA1 71 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 VPS13DQ5THJ4 4388 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 PCDH15Q96QU1 1955 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 F5P12259 2224 aa0.72□□□□□ -2.29
YBX3-214ENST00000544501 DNAH6Q9C0G6 4158 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 ESPL1Q14674 2120 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 HRNRQ86YZ3 2850 aaPredicted RBP0.71□□□□□ -2.3
YBX3-214ENST00000544501 ZNF106Q9H2Y7 1883 aaKnown RBP0.71□□□□□ -2.3
YBX3-214ENST00000544501 AKAP6Q13023 2319 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 EML5Q05BV3 1969 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 IGLV3-9A0A075B6K5 115 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 IGHV3-73A0A0B4J1V6 119 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 H3BPC8 53 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 UBFD1O14562 309 aaKnown RBP0.71□□□□□ -2.3
YBX3-214ENST00000544501 LY6HO94772 140 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 S100A9P06702 114 aaKnown RBP0.71□□□□□ -2.3
YBX3-214ENST00000544501 KRT7P08729 469 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 ATP6V0CP27449 155 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 HOXA6P31267 233 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 SULT1A2P50226 295 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 OR10A3P58181 314 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 FAM3AP98173 230 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 STX3Q13277 289 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 RAB31Q13636 194 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 OR4D1Q15615 310 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 EXOC3L4Q17RC7 722 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 CENPWQ5EE01 88 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 TIMM23BQ5SRD1 257 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 YIPF7Q8N8F6 280 aa0.71□□□□□ -2.3
YBX3-214ENST00000544501 ZNRF2Q8NHG8 242 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms