RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 IL6RP08887 468 aaPredicted RBP14.75□□□□□ -0.05
VIM-209ENST00000544301 NPY1RP25929 384 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 NCMAPQ5T1S8 102 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 MIC13Q5XKP0 118 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 SLC24A4Q8NFF2 622 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 OR13D1Q8NGV5 346 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 TCEAL7Q9BRU2 100 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 NPVFQ9HCQ7 196 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 ENY2Q9NPA8 101 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 LSM4Q9Y4Z0 139 aaKnown RBP14.75□□□□□ -0.05
VIM-209ENST00000544301 OR51B2Q9Y5P1 312 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 PIEZO2Q9H5I5 2752 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 ACACAQ13085 2346 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 S100A9P06702 114 aaKnown RBP14.75□□□□□ -0.05
VIM-209ENST00000544301 HOXA5P20719 270 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 TBR1Q16650 682 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 ARSJQ5FYB0 599 aaPredicted RBP14.75□□□□□ -0.05
VIM-209ENST00000544301 SLC16A13Q7RTY0 426 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 C16orf82Q7Z2V1 217 aa14.75□□□□□ -0.05
VIM-209ENST00000544301 YLPM1P49750 1951 aaKnown RBP14.74□□□□□ -0.05
VIM-209ENST00000544301 TRBV24-1A0A075B6N3 115 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 CLN5O75503 358 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 CA2P00918 260 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 IGKV1-16P04430 117 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 NPPCP23582 126 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 MEF2CQ06413 473 aaPredicted RBP14.74□□□□□ -0.05
VIM-209ENST00000544301 SPACA3Q8IXA5 215 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 GAL3ST2Q9H3Q3 398 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 SLC35D1Q9NTN3 355 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 DOK5Q9P104 306 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 PRNDQ9UKY0 176 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 APC2O95996 2303 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 SRRM4A7MD48 611 aaKnown RBP14.74□□□□□ -0.05
VIM-209ENST00000544301 HIST1H2BKO60814 126 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 FCN3O75636 299 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 HIST1H2BJP06899 126 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 HIST1H2BOP23527 126 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 HIST1H2BBP33778 126 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 NDUFA6P56556 154 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 HIST1H2BDP58876 126 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 HIST1H2BCP62807 126 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 RPL31P62899 125 aaKnown RBP14.74□□□□□ -0.05
VIM-209ENST00000544301 HIST2H2BEQ16778 126 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 RTL8BQ17RB0 113 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.74□□□□□ -0.05
VIM-209ENST00000544301 ASCL5Q7RTU5 278 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 OR10A7Q8NGE5 316 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 NANPQ8TBE9 248 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 HIST1H2BHQ93079 126 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 HIST1H2BNQ99877 126 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 HIST1H2BMQ99879 126 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 SAP30LQ9HAJ7 183 aa14.74□□□□□ -0.05
VIM-209ENST00000544301 TMEM178BH3BS89 294 aa14.73□□□□□ -0.05
VIM-209ENST00000544301 UPK2O00526 184 aa14.73□□□□□ -0.05
VIM-209ENST00000544301 PRR30Q53SZ7 412 aaPredicted RBP14.73□□□□□ -0.05
VIM-209ENST00000544301 HINT2Q9BX68 163 aa14.73□□□□□ -0.05
VIM-209ENST00000544301 UBE2G2P60604 165 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 FOXC1Q12948 553 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 ZNF833PQ6ZTB9 187 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 SSX8Q7RTT4 187 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 SSMEM1Q8WWF3 244 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 ZNF257Q9Y2Q1 563 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 PPIAL4EA0A075B759 164 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 PPIAL4DF5H284 164 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 J3QR06 171 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 TGOLN2O43493 480 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 PDE6DO43924 150 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 PFN1P07737 140 aaKnown RBP14.72□□□□□ -0.05
VIM-209ENST00000544301 STAG3L2P0CL84 134 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 STAG3L3P0CL85 134 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 PPIAL4FP0DN26 164 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 CCL3L1P16619 93 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 ATP5G3P48201 142 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 TMEM200BQ69YZ2 307 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 TEPPQ6URK8 271 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 WFIKKN1Q96NZ8 548 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 KCNIP2Q9NS61 270 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 PPIAL4AQ9Y536 164 aa14.72□□□□□ -0.05
VIM-209ENST00000544301 ARL14EPLP0DKL9 152 aa14.71□□□□□ -0.05
VIM-209ENST00000544301 PRCDQ00LT1 54 aa14.71□□□□□ -0.05
VIM-209ENST00000544301 CST9LP1Q5W188 147 aa14.71□□□□□ -0.05
VIM-209ENST00000544301 SPNS3Q6ZMD2 512 aa14.71□□□□□ -0.05
VIM-209ENST00000544301 OR51G1Q8NGK1 321 aa14.71□□□□□ -0.05
VIM-209ENST00000544301 ABHD5Q8WTS1 349 aa14.71□□□□□ -0.05
VIM-209ENST00000544301 RND1Q92730 232 aa14.71□□□□□ -0.05
VIM-209ENST00000544301 ZNF714Q96N38 554 aa14.71□□□□□ -0.05
VIM-209ENST00000544301 VENTXO95231 258 aa14.71□□□□□ -0.06
VIM-209ENST00000544301 CDX1P47902 265 aaPredicted RBP14.71□□□□□ -0.06
VIM-209ENST00000544301 B2MP61769 119 aa14.71□□□□□ -0.06
VIM-209ENST00000544301 GNB1P62873 340 aa14.71□□□□□ -0.06
VIM-209ENST00000544301 CCL17Q92583 94 aa14.71□□□□□ -0.06
VIM-209ENST00000544301 FRZBQ92765 325 aa14.71□□□□□ -0.06
VIM-209ENST00000544301 LRFN3Q9BTN0 628 aa14.71□□□□□ -0.06
VIM-209ENST00000544301 PLEKHA3Q9HB20 300 aa14.71□□□□□ -0.06
VIM-209ENST00000544301 SPTBN2O15020 2390 aa14.7□□□□□ -0.06
VIM-209ENST00000544301 TEX50A0A1B0GTY4 177 aa14.7□□□□□ -0.06
VIM-209ENST00000544301 IFITM10A6NMD0 228 aa14.7□□□□□ -0.06
VIM-209ENST00000544301 H7BYZ3 331 aa14.7□□□□□ -0.06
VIM-209ENST00000544301 PHOX2AO14813 284 aa14.7□□□□□ -0.06
VIM-209ENST00000544301 TNFRSF13BO14836 293 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms