RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	AP3S2	P59780	193 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	POLR2G	P62487	172 aa	Known RBP eCLIP	3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	NDP	Q00604	133 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	MMD	Q15546	238 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	FAM106A	Q4KMX7	169 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	LPCAT4	Q643R3	524 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660		Q6ZSN1	163 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	RASSF6	Q6ZTQ3	369 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	C5orf24	Q7Z6I8	188 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660		Q8N1X5	172 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	LINC00311	Q8N616	119 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	OR9Q2	Q8NGE9	314 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	OR51T1	Q8NGJ9	327 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	LYPD6B	Q8NI32	183 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	NUDCD2	Q8WVJ2	157 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	CMTM5	Q96DZ9	223 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	ACTR3C	Q9C0K3	210 aa	Predicted RBP	3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	EXOSC4	Q9NPD3	245 aa	Known RBP	3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	CMC2	Q9NRP2	79 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	MCUB	Q9NWR8	336 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	NDE1	Q9NXR1	346 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	BAIAP2	Q9UQB8	552 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	OR2W1	Q9Y3N9	320 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	GMPPB	Q9Y5P6	360 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	NUBP2	Q9Y5Y2	271 aa		3.59	□□□□□ -1.83
NPIPB4-219	ENST00000543660	MEIKIN	A0A087WXM9	373 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	IGKV1-12	A0A0C4DH73	117 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	RIIAD1	A6NNX1	92 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	BBIP1	A8MTZ0	92 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	TRDC	B7Z8K6	153 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660		H3BN98	237 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	NME4	O00746	187 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	GOSR2	O14653	212 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	IFNG	P01579	166 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	IGKV1D-12	P01611	117 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	C4BPB	P20851	252 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	CCL1	P22362	96 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	FGF9	P31371	208 aa	Predicted RBP	3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	SSTR5	P35346	364 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	AMT	P48728	403 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	ZNF137P	P52743	207 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	CDK5R1	Q15078	307 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	TNXA	Q16473	311 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	ECSCR	Q19T08	205 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	LRRC36	Q1X8D7	754 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	C5orf64	Q2M2E5	130 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	TRIM16L	Q309B1	348 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	LY6G6F	Q5SQ64	297 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	METTL21C	Q5VZV1	264 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	CD200R1L	Q6Q8B3	271 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660		Q6ZVQ6	151 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	AMIGO2	Q86SJ2	522 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	AKAP14	Q86UN6	197 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	RDH10	Q8IZV5	341 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	TCTEX1D1	Q8N7M0	179 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	CHST4	Q8NCG5	386 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	ZNF738	Q8NE65	137 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	OR2T33	Q8NG76	320 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	OR4D10	Q8NGI6	311 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	OR10V1	Q8NGI7	309 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	OR2K2	Q8NGT1	345 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	MRGPRD	Q8TDS7	321 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	BORCS8	Q96FH0	119 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	C8orf49	Q96NF6	230 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	GGTLC1	Q9BX51	225 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	MRO	Q9BYG7	248 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	INTS9	Q9NV88	658 aa	Known RBP	3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	ARMC1	Q9NVT9	282 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	GID8	Q9NWU2	228 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	WARS2	Q9UGM6	360 aa	Known RBP	3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	APLN	Q9ULZ1	77 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	TP53TG1	Q9Y2A0	90 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	AP3M1	Q9Y2T2	418 aa		3.58	□□□□□ -1.84
NPIPB4-219	ENST00000543660	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	TRAV39	A0A0B4J263	110 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	IGKV1-9	A0A0C4DH69	117 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	TRBV7-9	A0A0J9YWB2	115 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	SRRM4	A7MD48	611 aa	Known RBP	3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660		M0R036	132 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	DEGS1	O15121	323 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	SLC31A2	O15432	143 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	SOX14	O95416	240 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	RBP2	P50120	134 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	TCTA	P57738	103 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	TPPP2	P59282	170 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	ACTB	P60709	375 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	UBE2K	P61086	200 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	GAGE5	Q13069	117 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	GAGE6	Q13070	117 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	APOF	Q13790	326 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	ATP6V1F	Q16864	119 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	RSBN1	Q5VWQ0	802 aa	Predicted RBP	3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	ZNF660	Q6AZW8	331 aa	Predicted RBP	3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	FAHD1	Q6P587	224 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	SLC25A48	Q6ZT89	311 aa	Known RBP	3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	ZNF645	Q8N7E2	425 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	NPB	Q8NG41	125 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	TCTEX1D2	Q8WW35	142 aa		3.57	□□□□□ -1.84
NPIPB4-219	ENST00000543660	TLCD1	Q96CP7	247 aa		3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms