RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 LFNGQ8NES3 379 aa7.72□□□□□ -1.17
VEGFB-204ENST00000543462 OR5M8Q8NGP6 311 aa7.72□□□□□ -1.17
VEGFB-204ENST00000543462 TMEM56Q96MV1 263 aa7.72□□□□□ -1.17
VEGFB-204ENST00000543462 WDR12Q9GZL7 423 aaKnown RBP7.72□□□□□ -1.17
VEGFB-204ENST00000543462 COPZ2Q9P299 210 aa7.72□□□□□ -1.17
VEGFB-204ENST00000543462 C14orf166Q9Y224 244 aaKnown RBP7.72□□□□□ -1.17
VEGFB-204ENST00000543462 TSSC4Q9Y5U2 329 aaPredicted RBP7.72□□□□□ -1.17
VEGFB-204ENST00000543462 TMEM56-RWDD3S4R434 201 aa7.72□□□□□ -1.17
VEGFB-204ENST00000543462 IGLC7A0M8Q6 106 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 C15orf61A6NNL5 157 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 H3BUA1 57 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 LYRM1O43325 122 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 UPK1BO75841 260 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 KRASP01116 189 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 OPN1MWP04001 364 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 OPN1MW2P0DN77 364 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 OPN1MW3P0DN78 364 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 GNB1P62873 340 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 ASAH1Q13510 395 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 ZNF846Q147U1 533 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 RBMS2Q15434 407 aaKnown RBP7.71□□□□□ -1.18
VEGFB-204ENST00000543462 TNXAQ16473 311 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 C2orf68Q2NKX9 166 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 SP6Q3SY56 376 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 UNQ5815/PRO19632Q6UWF5 114 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 FAM110DQ8TAY7 271 aaPredicted RBP7.71□□□□□ -1.18
VEGFB-204ENST00000543462 TMEM68Q96MH6 324 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 SCGB3A2Q96PL1 93 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 SRSF8Q9BRL6 282 aaKnown RBP7.71□□□□□ -1.18
VEGFB-204ENST00000543462 ZFP57Q9NU63 452 aa7.71□□□□□ -1.18
VEGFB-204ENST00000543462 FBN3Q75N90 2809 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 TRBV9A0A0B4J1U6 114 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 TEX13DA0A0J9YY54 714 aaPredicted RBP7.7□□□□□ -1.18
VEGFB-204ENST00000543462 A0A1W2PN81 502 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 MSGN1A6NI15 193 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 NPIPB5A8MRT5 1133 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 M0QZ24 198 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 SERPINE2P07093 398 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 CRYGCP07315 174 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 AREGP15514 252 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 SLC6A1P30531 599 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 CHRNA7P36544 502 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 RPL27AP46776 148 aaKnown RBP7.7□□□□□ -1.18
VEGFB-204ENST00000543462 CDX1P47902 265 aaPredicted RBP7.7□□□□□ -1.18
VEGFB-204ENST00000543462 MECP2P51608 486 aaKnown RBP7.7□□□□□ -1.18
VEGFB-204ENST00000543462 UBE2MP61081 183 aaKnown RBP7.7□□□□□ -1.18
VEGFB-204ENST00000543462 ERVK-16P61578 105 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 RUNX1Q01196 453 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 TMEM267Q0VDI3 215 aaPredicted RBP7.7□□□□□ -1.18
VEGFB-204ENST00000543462 FHL3Q13643 280 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 TMEM128Q5BJH2 165 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 CXorf66Q5JRM2 361 aaPredicted RBP7.7□□□□□ -1.18
VEGFB-204ENST00000543462 ZNF429Q86V71 674 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 SLC25A42Q86VD7 318 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 SELENOHQ8IZQ5 122 aaKnown RBP7.7□□□□□ -1.18
VEGFB-204ENST00000543462 TTC9CQ8N5M4 171 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 ZNF491Q8N8L2 437 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 DMBX1Q8NFW5 382 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 IL22RA2Q969J5 263 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 SPIN2AQ99865 258 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 SPIN2BQ9BPZ2 258 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 GNB4Q9HAV0 340 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 PALMDQ9NP74 551 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 NDUFA4L2Q9NRX3 87 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 DMRT1Q9Y5R6 373 aa7.7□□□□□ -1.18
VEGFB-204ENST00000543462 A0A0B4J293 547 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 TCRBV4S1A1TA0A5B7 111 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 HMX3A6NHT5 357 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 INS-IGF2F8WCM5 200 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 I3L521 148 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 CNIH1O95406 144 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 CTRB1P17538 263 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 RAB9AP51151 201 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 WT1-ASQ06250 92 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 PPP1R1AQ13522 171 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 IZUMO4Q1ZYL8 232 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 PDLIM3Q53GG5 364 aaPredicted RBP7.69□□□□□ -1.18
VEGFB-204ENST00000543462 NMSQ5H8A3 153 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 CTRB2Q6GPI1 263 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 THOC7Q6I9Y2 204 aaKnown RBP7.69□□□□□ -1.18
VEGFB-204ENST00000543462 Q6ZRM9 215 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 SGPP2Q8IWX5 399 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 LRTM2Q8N967 370 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 OR5B3Q8NH48 314 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 ABHD5Q8WTS1 349 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 CASTOR1Q8WTX7 329 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 C4orf3Q8WVX3 66 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 RBPMSQ93062 196 aaKnown RBP7.69□□□□□ -1.18
VEGFB-204ENST00000543462 UBE2E2Q96LR5 201 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 P2RX4Q99571 388 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 QTRT1Q9BXR0 403 aaKnown RBP7.69□□□□□ -1.18
VEGFB-204ENST00000543462 SLA2Q9H6Q3 261 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 PRR13Q9NZ81 148 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 PRNDQ9UKY0 176 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 FLVCR2Q9UPI3 526 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 ZNF257Q9Y2Q1 563 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 NSG2Q9Y328 171 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 DNAH3Q8TD57 4116 aa7.69□□□□□ -1.18
VEGFB-204ENST00000543462 TEX50A0A1B0GTY4 177 aa7.68□□□□□ -1.18
VEGFB-204ENST00000543462 LINC00854A0A1B0GVQ3 168 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms