RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 GNB1P62873 340 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 PJVKQ0ZLH3 352 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 DHRS2Q13268 280 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 TNXAQ16473 311 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 MRGPRG-AS1Q2M3A8 158 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 C12orf54Q6X4T0 127 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 ZNF429Q86V71 674 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 MRPL41Q8IXM3 137 aaKnown RBP9.6□□□□□ -0.87
DDX55-210ENST00000543016 OR4A16Q8NH70 328 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 ABHD5Q8WTS1 349 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 RBMXL1Q96E39 390 aaKnown RBP9.6□□□□□ -0.87
DDX55-210ENST00000543016 MARVELD1Q9BSK0 173 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 PARP11Q9NR21 331 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 TPSG1Q9NRR2 321 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 COA4Q9NYJ1 87 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 TMED3Q9Y3Q3 217 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 CUBNO60494 3623 aa9.6□□□□□ -0.87
DDX55-210ENST00000543016 PSMB11A5LHX3 300 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 C15orf61A6NNL5 157 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 ATP6V0E1O15342 81 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 BRI3O95415 125 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 DHFRP00374 187 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 IGKV1-5P01602 117 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 SLC25A6P12236 298 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 RPL27AP46776 148 aaKnown RBP9.59□□□□□ -0.87
DDX55-210ENST00000543016 TEX38Q6PEX7 206 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 KLHDC1Q8N7A1 406 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 OR5M8Q8NGP6 311 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 OR1L8Q8NGR8 309 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 LHFPL5Q8TAF8 219 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 WIPF2Q8TF74 440 aaPredicted RBP9.59□□□□□ -0.87
DDX55-210ENST00000543016 MITD1Q8WV92 249 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 SRSF12Q8WXF0 261 aaKnown RBP9.59□□□□□ -0.87
DDX55-210ENST00000543016 PHB2Q99623 299 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 ZNF747Q9BV97 191 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 GPN1Q9HCN4 374 aaPredicted RBP9.59□□□□□ -0.87
DDX55-210ENST00000543016 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.59□□□□□ -0.87
DDX55-210ENST00000543016 TMEM14BQ9NUH8 114 aa9.59□□□□□ -0.87
DDX55-210ENST00000543016 FOXA2Q9Y261 457 aaPredicted RBP9.59□□□□□ -0.87
DDX55-210ENST00000543016 PLXNB1O43157 2135 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 A0A1B0GU03 582 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 MSGN1A6NI15 193 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 LINC01548A6NM66 108 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 INMT-MINDY4F8WBC2 141 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 H3BUA1 57 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 ELANEP08246 267 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 EGR2P11161 476 aaPredicted RBP9.58□□□□□ -0.88
DDX55-210ENST00000543016 SSBP2P81877 361 aaPredicted RBP9.58□□□□□ -0.88
DDX55-210ENST00000543016 NDPQ00604 133 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 CFHR3Q02985 330 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 RGS21Q2M5E4 152 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 AARDQ4LEZ3 155 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 SLC35G3Q8N808 338 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 C3orf56Q8N813 242 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 MINDY2Q8NBR6 621 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 OR4X2Q8NGF9 303 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 OR52E5Q8NH55 327 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 GRPEL2Q8TAA5 225 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 ZNF431Q8TF32 576 aaPredicted RBP9.58□□□□□ -0.88
DDX55-210ENST00000543016 CASTOR1Q8WTX7 329 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 WFDC12Q8WWY7 111 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 PDCD10Q9BUL8 212 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 QTRT1Q9BXR0 403 aaKnown RBP9.58□□□□□ -0.88
DDX55-210ENST00000543016 OR51B2Q9Y5P1 312 aa9.58□□□□□ -0.88
DDX55-210ENST00000543016 TRAV3A0A0B4J244 114 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 SNRPGP15A8MWD9 76 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 RBMXL2O75526 392 aaKnown RBP9.57□□□□□ -0.88
DDX55-210ENST00000543016 IFNA21P01568 189 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 IGHG4P01861 327 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 OR9G9P0C7N8 305 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 TRAPPC2P0DI81 140 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 TRAPPC2BP0DI82 140 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 SULT1A3P0DMM9 295 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 SULT1A4P0DMN0 295 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 PPIFP30405 207 aaKnown RBP9.57□□□□□ -0.88
DDX55-210ENST00000543016 OR2B8PP59922 312 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 HSPE1P61604 102 aaKnown RBP9.57□□□□□ -0.88
DDX55-210ENST00000543016 FOXE3Q13461 319 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 TMEM95Q3KNT9 176 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 ANKRD55Q3KP44 614 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 C19orf54Q5BKX5 351 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 NMSQ5H8A3 153 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 UNQ5815/PRO19632Q6UWF5 114 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 SHISA2Q6UWI4 295 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 RNF152Q8N8N0 203 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 LFNGQ8NES3 379 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 OR5AU1Q8NGC0 362 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 SPATA3Q8NHX4 192 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 TAF15Q92804 592 aaKnown RBP eCLIP9.57□□□□□ -0.88
DDX55-210ENST00000543016 NOL4LQ96MY1 436 aaPredicted RBP9.57□□□□□ -0.88
DDX55-210ENST00000543016 MDFIQ99750 246 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 NDUFA4L2Q9NRX3 87 aa9.57□□□□□ -0.88
DDX55-210ENST00000543016 A0A0B4J293 547 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 TEX50A0A1B0GTY4 177 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 A0A1W2PN81 502 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 NPIPB5A8MRT5 1133 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 INS-IGF2F8WCM5 200 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 CYB5BO43169 146 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 IGLV1-40P01703 118 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 OPN1MWP04001 364 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms