RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 KCNS1Q96KK3 526 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 PGLYRP3Q96LB9 341 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF382Q96SR6 550 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 STACQ99469 402 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 S100A13Q99584 98 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 PHB2Q99623 299 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 TBL1YQ9BQ87 522 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 GINS4Q9BRT9 223 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 CHAC1Q9BUX1 264 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 SNHG12Q9BXW3 62 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 SEC11CQ9BY50 192 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 SAMD10Q9BYL1 202 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 RBM22Q9NW64 420 aaKnown RBP eCLIP2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 TXNL4BQ9NX01 149 aaKnown RBP2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 RASL12Q9NYN1 266 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 GSKIPQ9P0R6 139 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 GNG8Q9UK08 70 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF222Q9UK12 451 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 PSG11Q9UQ72 335 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 ZFP30Q9Y2G7 519 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 PCYT1BQ9Y5K3 369 aaPredicted RBP2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM56-RWDD3S4R434 201 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 V9GYS6 101 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 TDRD15B5MCY1 1934 aaKnown RBP2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 LAMA5O15230 3695 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 FREM2Q5SZK8 3169 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 DOPEY1Q5JWR5 2465 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 LCTP09848 1927 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 LRRK2Q5S007 2527 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 PDCD11Q14690 1871 aaKnown RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 RALGAPA2Q2PPJ7 1873 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 NYNRINQ9P2P1 1898 aaKnown RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 IGHV3-66A0A0C4DH42 116 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 A0A1B0GV72 72 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM269A0A1B0GVZ9 245 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 C20orf202A1L168 122 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF705GA8MUZ8 300 aaPredicted RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 MANBAO00462 879 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 TAAR5O14804 337 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 TCF21O43680 179 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 GCM2O75603 506 aaPredicted RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC25A14O95258 325 aaPredicted RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 SIX6O95475 246 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF682O95780 498 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 CXCL8P10145 99 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF7P17097 686 aaPredicted RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 NFYAP23511 347 aaPredicted RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 TSPOP30536 169 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF136P52737 540 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 GFERP55789 205 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 CTBP2P56545 445 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 MAXP61244 160 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 RPL19P84098 196 aaKnown RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 CDK6Q00534 326 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 JOSD1Q15040 202 aaPredicted RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC9A3R2Q15599 337 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 HMGN3Q15651 99 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 LPAL2Q16609 132 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 COX19Q49B96 90 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 SPIN4Q56A73 249 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 OTPQ5XKR4 325 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 EIF5AL1Q6IS14 154 aaKnown RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 TCF24Q7RTU0 167 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 DEFB106AQ8N104 65 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 KRTCAP2Q8N6L1 136 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 CLDN22Q8N7P3 220 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 OR9Q1Q8NGQ5 310 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 OR13C8Q8NGS7 320 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 OR6K3Q8NGY3 331 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 OR52P1PQ8NH57 321 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 OR4C6Q8NH72 309 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 SYNPRQ8TBG9 265 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 CD200R1Q8TD46 325 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 ORAOV1Q8WV07 137 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 RNF138Q8WVD3 245 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 ASB13Q8WXK3 278 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM158Q8WZ71 300 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 FAM104AQ969W3 186 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 PTX4Q96A99 478 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 PHYHIPLQ96FC7 376 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC35E1Q96K37 410 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 PKMYT1Q99640 499 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 AIF1LQ9BQI0 150 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 VPS25Q9BRG1 176 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 SUCNR1Q9BXA5 334 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 CXCL16Q9H2A7 254 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 RHOFQ9HBH0 211 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC2A9Q9NRM0 540 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 SPANXB1Q9NS25 103 aaPredicted RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 NDUFB11Q9NX14 153 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 COMMD9Q9P000 198 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 PCTPQ9UKL6 214 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 NEU3Q9UQ49 428 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 TBL2Q9Y4P3 447 aaKnown RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 DMXL2Q8TDJ6 3036 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 AKAP13Q12802 2813 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 UBR5O95071 2799 aaPredicted RBP2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 ITPR3Q14573 2671 aa2.74□□□□□ -1.97
SFSWAP-211ENST00000542813 ANKRD12Q6UB98 2062 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 HCFC1P51610 2035 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms