RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 C8orf88P0DMB2 117 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 COL8A1P27658 744 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 NUBP1P53384 320 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 FXYD3Q14802 87 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 COL5A1-AS1Q5SY13 56 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 PRSS3P2Q8NHM4 247 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 NUP210Q8TEM1 1887 aaPredicted RBP6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 HS3ST6Q96QI5 342 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 CREBBPQ92793 2442 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 SLC17A3O00476 420 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 IGLV3-1P01715 115 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 IL6RP08887 468 aaPredicted RBP6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 IGHV1-2P23083 117 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 PRRX1P54821 245 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 RPL8P62917 257 aaKnown RBP6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 GFRALQ6UXV0 394 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 C20orf204Q6ZNR8 217 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 OR4F17Q8NGA8 305 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 ELOVL1Q9BW60 279 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 SFXN3Q9BWM7 321 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 MS4A5Q9H3V2 200 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 DNAJC4Q9NNZ3 241 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 ISLRO14498 428 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 RRHO14718 337 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 CD82P27701 267 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 LYZP61626 148 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 SELENOTP62341 195 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 ZNF146Q15072 292 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 OR4C5Q8NGB2 326 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 PERPQ96FX8 193 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 AAMDCQ9H7C9 122 aa6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 SLC25A10Q9UBX3 287 aaPredicted RBP6.89□□□□□ -1.31
PRKAB1-207ENST00000542698 PCNX2A6NKB5 2137 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 TRBV6-6A0A0A6YYG2 114 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 IGKV1-6A0A0C4DH72 117 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 SCO2A0A1W2PP80 73 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 M0R296 226 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 CA2P00918 260 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 CSN3P07498 182 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 RNF224P0DH78 156 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 TMEM11P17152 192 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 GNB2P62879 340 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 Q56UQ5 140 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 FAM90A2PQ658T7 463 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 COLCA1Q6ZS62 124 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 DOLPP1Q86YN1 238 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 OR4B1Q8NGF8 309 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 OR2T6Q8NHC8 308 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 GATAD1Q8WUU5 269 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 C19orf24Q9BVV8 132 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 WDR83OSQ9Y284 106 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 LNP1A1A4G5 178 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 C9orf172C9J069 976 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 PSPNO60542 156 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 C1QTNF9P0C862 333 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 Q0VFX4 171 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 TMEM14EPQ6UXP3 125 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 OR5R1Q8NH85 324 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 IMMP2LQ96T52 175 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 VPS25Q9BRG1 176 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 NDUFAF3Q9BU61 184 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 TMEM191AQ9H0A3 160 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 PRO3102Q9H379 93 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 HIF1ANQ9NWT6 349 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 GOLT1BQ9Y3E0 138 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 AMMECR1Q9Y4X0 333 aaPredicted RBP6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 INSIG2Q9Y5U4 225 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 SPAARA0A1B0GVQ0 90 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 A8MWL6 223 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 LILRA1O75019 489 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 CGAP01215 116 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 AMBPP02760 352 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 ARL16Q0P5N6 197 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 CENPWQ5EE01 88 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 LYPD6BQ8NI32 183 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 PROK2Q9HC23 129 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 IL36BQ9NZH7 164 aa6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 MKI67P46013 3256 aaKnown RBP6.88□□□□□ -1.31
PRKAB1-207ENST00000542698 PGPEP1LA6NFU8 196 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 PLAUP00749 431 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 IGHV2-5P01817 119 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 APELAP0DMC3 54 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 SRIP30626 198 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 TAS2R60P59551 318 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 VWA1Q6PCB0 445 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 NDFIP1Q9BT67 221 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 KLF2Q9Y5W3 355 aaPredicted RBP6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 KIF26AQ9ULI4 1882 aaPredicted RBP6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 PPIAL4EA0A075B759 164 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 FOXI3A8MTJ6 420 aaPredicted RBP6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 PPIAL4DF5H284 164 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 PPIAL4FP0DN26 164 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 CD99P14209 185 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 COX7A1P24310 79 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 NTF4P34130 210 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 GCSAMLQ5JQS6 135 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 FDCSPQ8NFU4 85 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 CYYR1Q96J86 154 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 IDI2-AS1Q9NZ38 188 aa6.87□□□□□ -1.31
PRKAB1-207ENST00000542698 PPIAL4AQ9Y536 164 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms