RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ZNF184Q99676 751 aaPredicted RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 VGLL1Q99990 258 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF426Q9BUY5 554 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 TXLNGYQ9BZA5 131 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR52D1Q9H346 318 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 TMEM231Q9H6L2 316 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 RAB9BQ9NP90 201 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 NOP10Q9NPE3 64 aaKnown RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 RPS10P5Q9NQ39 176 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 THUMPD1Q9NXG2 353 aaKnown RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 GNG12Q9UBI6 72 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 Q9UF83 564 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 NUFIP1Q9UHK0 495 aaKnown RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 GSTK1Q9Y2Q3 226 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 CARHSP1Q9Y2V2 147 aaKnown RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGHV3OR16-13A0A075B7E8 117 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGHV3-74A0A0B4J1X5 117 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 TRAV8-6A0A0B4J262 113 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 TRBV2A0A0J9YWF9 115 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 PLAC8L1A1L4L8 177 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 PRORSD1PA6NEY8 169 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 HELTA6NFD8 242 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 CPSF4LA6NMK7 179 aaKnown RBP1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 MIF4GDA9UHW6 222 aaKnown RBP1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 H3BQF6 201 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 SRSF10O75494 262 aaKnown RBP1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 ACTL6BO94805 426 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 YIF1AO95070 293 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 KRT75O95678 551 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGHV3-30P01768 117 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGHV3-33P01772 117 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 RLN2P04090 185 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 CD14P08571 375 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGHV3-30-3P0DP02 117 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGHV3-30-5P0DP03 117 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 DEFA4P12838 97 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 HLA-DRB4P13762 266 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 ATP6V1B1P15313 513 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 ELK1P19419 428 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 SRIP30626 198 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 ANP32AP39687 249 aaKnown RBP1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 RBM34P42696 430 aaKnown RBP1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF121P58317 390 aaPredicted RBP1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 SNRPD3P62318 126 aaKnown RBP1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 PSG9Q00887 426 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLAQ13239 276 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 DGCR6Q14129 220 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 GALNTL6Q49A17 601 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 CLVS2Q5SYC1 327 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 LCE1CQ5T751 118 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 LCE1BQ5T7P3 118 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF833PQ6ZTB9 187 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLC25A26Q70HW3 274 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 FP248Q71RG6 208 aaPredicted RBP1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 PRSS45Q7RTY3 260 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 DCXRQ7Z4W1 244 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 TMEM144Q7Z5S9 345 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 ADCK1Q86TW2 530 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLC22A9Q8IVM8 553 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 PDIK1LQ8N165 341 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 KRTCAP2Q8N6L1 136 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 LRRC75AQ8NAA5 344 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR51A7Q8NH64 312 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF502Q8TBZ5 544 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 BLNKQ8WV28 456 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNRF4Q8WWF5 429 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 SRSF12Q8WXF0 261 aaKnown RBP1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 PTX4Q96A99 478 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 VPS33AQ96AX1 596 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLAMF6Q96DU3 332 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 TSSK2Q96PF2 358 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 MID1IP1Q9NPA3 183 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 MRGBPQ9NV56 204 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 THAP1Q9NVV9 213 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 RBFOX1Q9NWB1 397 aaKnown RBP1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 DOK5Q9P104 306 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 B9D1Q9UPM9 204 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 EXOGQ9Y2C4 368 aaKnown RBP1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 MED31Q9Y3C7 131 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 HLA-DRB4X5D2U9 266 aa1.17□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGHV3-64A0A075B6Q5 118 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGKV2D-24A0A075B6R9 120 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 A0A0A0MQY5 61 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 FAM230AA0A1W2PPH8 454 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 MFSD2BA6NFX1 497 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 A8MT66 165 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 C5orf58C9J3I9 102 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 H0Y9J4 135 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 C15orf65H3BRN8 121 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 DCTN6O00399 190 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 ORC5O43913 435 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 TPST1O60507 370 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 PRAF2O60831 178 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 GMNNO75496 209 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 PIAS1O75925 651 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 DCTN3O75935 186 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 SCGB1D2O95969 90 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 NAPSAO96009 420 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 CST1P01037 141 aa1.16□□□□□ -2.22
TRAV1-1-201ENST00000542354 LYNP07948 512 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms