RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 IGSF11Q5DX21 431 aa11.11□□□□□ -0.63
PAAF1-211ENST00000542293 PUSL1Q8N0Z8 303 aaKnown RBP11.11□□□□□ -0.63
PAAF1-211ENST00000542293 TMEM116Q8NCL8 245 aa11.11□□□□□ -0.63
PAAF1-211ENST00000542293 GIMAP1Q8WWP7 306 aa11.11□□□□□ -0.63
PAAF1-211ENST00000542293 BSCL2Q96G97 398 aaPredicted RBP11.11□□□□□ -0.63
PAAF1-211ENST00000542293 YTHDF1Q9BYJ9 559 aaKnown RBP11.11□□□□□ -0.63
PAAF1-211ENST00000542293 TMEM14BQ9NUH8 114 aa11.11□□□□□ -0.63
PAAF1-211ENST00000542293 UBBP0CG47 229 aa11.1□□□□□ -0.63
PAAF1-211ENST00000542293 ETV1P50549 477 aa11.1□□□□□ -0.63
PAAF1-211ENST00000542293 YIF1BQ5BJH7 314 aa11.1□□□□□ -0.63
PAAF1-211ENST00000542293 NKAIN3Q8N8D7 197 aa11.1□□□□□ -0.63
PAAF1-211ENST00000542293 OR4A4PQ8NGN8 299 aa11.1□□□□□ -0.63
PAAF1-211ENST00000542293 VN1R17PQ8TDU5 208 aa11.1□□□□□ -0.63
PAAF1-211ENST00000542293 FRZBQ92765 325 aa11.1□□□□□ -0.63
PAAF1-211ENST00000542293 PGLYRP3Q96LB9 341 aa11.1□□□□□ -0.63
PAAF1-211ENST00000542293 SLC29A1Q99808 456 aa11.1□□□□□ -0.63
PAAF1-211ENST00000542293 C12orf4Q9NQ89 552 aa11.1□□□□□ -0.63
PAAF1-211ENST00000542293 IGHV3OR16-13A0A075B7E8 117 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 TRBV6-7A0A0A0MS04 114 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 IGHV3-74A0A0B4J1X5 117 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 RAB27BO00194 218 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 DFFBO76075 338 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 SPP1P10451 314 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 CALB2P22676 271 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 FAM3BP58499 235 aaPredicted RBP11.09□□□□□ -0.63
PAAF1-211ENST00000542293 OR2B11Q5JQS5 317 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 SPSB3Q6PJ21 355 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 ZFP41Q8N8Y5 198 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 DERL3Q96Q80 235 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 CABLES2Q9BTV7 478 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 MRPS18AQ9NVS2 196 aaKnown RBP11.09□□□□□ -0.63
PAAF1-211ENST00000542293 SMPD3Q9NY59 655 aaPredicted RBP11.09□□□□□ -0.63
PAAF1-211ENST00000542293 MDFICQ9P1T7 246 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 POMPQ9Y244 141 aa11.09□□□□□ -0.63
PAAF1-211ENST00000542293 RBM7Q9Y580 266 aaKnown RBP11.09□□□□□ -0.63
PAAF1-211ENST00000542293 TMEM14DPA8MWL7 114 aa11.08□□□□□ -0.64
PAAF1-211ENST00000542293 FABP7O15540 132 aa11.08□□□□□ -0.64
PAAF1-211ENST00000542293 CELP19835 753 aa11.08□□□□□ -0.64
PAAF1-211ENST00000542293 RPL30P62888 115 aaKnown RBP11.08□□□□□ -0.64
PAAF1-211ENST00000542293 QRFPP83859 136 aa11.08□□□□□ -0.64
PAAF1-211ENST00000542293 TCF24Q7RTU0 167 aa11.08□□□□□ -0.64
PAAF1-211ENST00000542293 OR10J5Q8NHC4 309 aa11.08□□□□□ -0.64
PAAF1-211ENST00000542293 VSTM2AQ8TAG5 236 aa11.08□□□□□ -0.64
PAAF1-211ENST00000542293 CMTM3Q96MX0 182 aa11.08□□□□□ -0.64
PAAF1-211ENST00000542293 LPAR5Q9H1C0 372 aa11.08□□□□□ -0.64
PAAF1-211ENST00000542293 BABAM2Q9NXR7 383 aa11.08□□□□□ -0.64
PAAF1-211ENST00000542293 OAZ3Q9UMX2 235 aa11.08□□□□□ -0.64
PAAF1-211ENST00000542293 IGHV3-21A0A0B4J1V1 117 aa11.07□□□□□ -0.64
PAAF1-211ENST00000542293 IGLC7A0M8Q6 106 aa11.07□□□□□ -0.64
PAAF1-211ENST00000542293 FOXI3A8MTJ6 420 aaPredicted RBP11.07□□□□□ -0.64
PAAF1-211ENST00000542293 CRHBPP24387 322 aa11.07□□□□□ -0.64
PAAF1-211ENST00000542293 TMEM50BP56557 158 aa11.07□□□□□ -0.64
PAAF1-211ENST00000542293 PAFAH1B2P68402 229 aa11.07□□□□□ -0.64
PAAF1-211ENST00000542293 ZNF66Q6ZN08 573 aa11.07□□□□□ -0.64
PAAF1-211ENST00000542293 ZNRF2Q8NHG8 242 aa11.07□□□□□ -0.64
PAAF1-211ENST00000542293 CMSS1Q9BQ75 279 aaKnown RBP11.07□□□□□ -0.64
PAAF1-211ENST00000542293 MS4A6AQ9H2W1 248 aa11.07□□□□□ -0.64
PAAF1-211ENST00000542293 THYN1Q9P016 225 aa11.07□□□□□ -0.64
PAAF1-211ENST00000542293 KNCNA6PVL3 124 aa11.06□□□□□ -0.64
PAAF1-211ENST00000542293 OR2B8PP59922 312 aa11.06□□□□□ -0.64
PAAF1-211ENST00000542293 RPL8P62917 257 aaKnown RBP11.06□□□□□ -0.64
PAAF1-211ENST00000542293 PLA2G7Q13093 441 aa11.06□□□□□ -0.64
PAAF1-211ENST00000542293 HSP90B2PQ58FF3 399 aa11.06□□□□□ -0.64
PAAF1-211ENST00000542293 LCE2AQ5TA79 106 aaPredicted RBP11.06□□□□□ -0.64
PAAF1-211ENST00000542293 KCTD9Q7L273 389 aa11.06□□□□□ -0.64
PAAF1-211ENST00000542293 LILRB2Q8N423 598 aa11.06□□□□□ -0.64
PAAF1-211ENST00000542293 ARGLU1Q9NWB6 273 aaPredicted RBP11.06□□□□□ -0.64
PAAF1-211ENST00000542293 HSF4Q9ULV5 492 aa11.06□□□□□ -0.64
PAAF1-211ENST00000542293 TMED3Q9Y3Q3 217 aa11.06□□□□□ -0.64
PAAF1-211ENST00000542293 NUPL2O15504 423 aaKnown RBP11.05□□□□□ -0.64
PAAF1-211ENST00000542293 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
PAAF1-211ENST00000542293 HTN3P15516 51 aa11.05□□□□□ -0.64
PAAF1-211ENST00000542293 HLA-GP17693 338 aa11.05□□□□□ -0.64
PAAF1-211ENST00000542293 BRWD1-AS2P59051 145 aa11.05□□□□□ -0.64
PAAF1-211ENST00000542293 ZIK1Q3SY52 487 aaPredicted RBP11.05□□□□□ -0.64
PAAF1-211ENST00000542293 C1orf100Q5SVJ3 147 aa11.05□□□□□ -0.64
PAAF1-211ENST00000542293 TMEM88Q6PEY1 159 aa11.05□□□□□ -0.64
PAAF1-211ENST00000542293 TMPRSS11AQ6ZMR5 421 aa11.05□□□□□ -0.64
PAAF1-211ENST00000542293 FAM89BQ8N5H3 189 aa11.05□□□□□ -0.64
PAAF1-211ENST00000542293 ARHGAP5-AS1Q96IT6 56 aa11.05□□□□□ -0.64
PAAF1-211ENST00000542293 OR10C1Q96KK4 312 aa11.05□□□□□ -0.64
PAAF1-211ENST00000542293 PECRQ9BY49 303 aa11.05□□□□□ -0.64
PAAF1-211ENST00000542293 FGF20Q9NP95 211 aaPredicted RBP11.05□□□□□ -0.64
PAAF1-211ENST00000542293 SAC3D1A6NKF1 404 aa11.04□□□□□ -0.64
PAAF1-211ENST00000542293 DNASE2O00115 360 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-211ENST00000542293 CTSGP08311 255 aa11.04□□□□□ -0.64
PAAF1-211ENST00000542293 RHOXF1Q8NHV9 184 aa11.04□□□□□ -0.64
PAAF1-211ENST00000542293 SCARB1Q8WTV0 552 aa11.04□□□□□ -0.64
PAAF1-211ENST00000542293 DGCR14Q96DF8 476 aaKnown RBP11.04□□□□□ -0.64
PAAF1-211ENST00000542293 C21orf62Q9NYP8 219 aa11.04□□□□□ -0.64
PAAF1-211ENST00000542293 MRPS7Q9Y2R9 242 aaKnown RBP11.04□□□□□ -0.64
PAAF1-211ENST00000542293 PRELID3BQ9Y3B1 194 aa11.04□□□□□ -0.64
PAAF1-211ENST00000542293 TRAV14DV4A0A0A6YYC5 116 aa11.03□□□□□ -0.64
PAAF1-211ENST00000542293 GYS2P54840 703 aa11.03□□□□□ -0.64
PAAF1-211ENST00000542293 H1FOOQ8IZA3 346 aaPredicted RBP11.03□□□□□ -0.64
PAAF1-211ENST00000542293 UBAC2Q8NBM4 344 aa11.03□□□□□ -0.64
PAAF1-211ENST00000542293 OR4S2Q8NH73 311 aa11.03□□□□□ -0.64
PAAF1-211ENST00000542293 MAFIPQ8WZ33 124 aa11.03□□□□□ -0.64
PAAF1-211ENST00000542293 ST8SIA2Q92186 375 aa11.03□□□□□ -0.64
PAAF1-211ENST00000542293 Q96MT0 163 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms