RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, human

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITM2C-208	ENST00000541852	CATR1	Q13166	79 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	THOC7	Q6I9Y2	204 aa	Known RBP	11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	IZUMO2	Q6UXV1	221 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	SLC38A6	Q8IZM9	456 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	BEST4	Q8NFU0	473 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	CCDC140	Q96MF4	163 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	FAM110A	Q9BQ89	295 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	GGTLC1	Q9BX51	225 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	COMMD5	Q9GZQ3	224 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	RETN	Q9HD89	108 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	HRASLS	Q9HDD0	168 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	RHBDL2	Q9NX52	303 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	RRP15	Q9Y3B9	282 aa	Known RBP	11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	UFC1	Q9Y3C8	167 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	ETV7	Q9Y603	341 aa		11.21	□□□□□ -0.61
ITM2C-208	ENST00000541852	IGLV11-55	A0A075B6I3	123 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	TMEM213	A2RRL7	107 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	AREG	P15514	252 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	PTBP1	P26599	531 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	FCGR2C	P31995	323 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	POU2AF1	Q16633	256 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	SFXN4	Q6P4A7	337 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	SSX9	Q7RTT3	188 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	HOGA1	Q86XE5	327 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	TMEM61	Q8N0U2	210 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	SPAG16	Q8N0X2	631 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	SECTM1	Q8WVN6	248 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	ATP6V0B	Q99437	205 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	DIABLO	Q9NR28	239 aa		11.2	□□□□□ -0.62
ITM2C-208	ENST00000541852	UBE2C	O00762	179 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	SSX5	O60225	188 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	IGHV3-23	P01764	117 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	PSMB9	P28065	219 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	CBX5	P45973	191 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	OR2B8P	P59922	312 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	TIMM50	Q3ZCQ8	353 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	PLET1	Q6UQ28	207 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	OR2C3	Q8N628	320 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	OR13F1	Q8NGS4	319 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	VN1R17P	Q8TDU5	208 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	GIMAP1	Q8WWP7	306 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	SLC5A7	Q9GZV3	580 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	C5orf66	Q9H5L9	145 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	PLEKHA2	Q9HB19	425 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	CCL28	Q9NRJ3	127 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	MLX	Q9UH92	298 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	TP53TG1	Q9Y2A0	90 aa		11.19	□□□□□ -0.62
ITM2C-208	ENST00000541852	TRAV18	A0A075B6X5	111 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852		A0A1B0GW64	132 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	SMIM30	A4D0T7	59 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	UPK2	O00526	184 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	PPY	P01298	95 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	APOC4	P55056	127 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	TM4SF20	Q53R12	229 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	LAMTOR1	Q6IAA8	161 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852		Q6ZWC4	215 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	WFDC3	Q8IUB2	231 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	SPART	Q8N0X7	666 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	CADM3	Q8N126	398 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	OR1L6	Q8NGR2	347 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	LGALS14	Q8TCE9	139 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	WFDC10A	Q9H1F0	79 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852		Q9H521	79 aa		11.18	□□□□□ -0.62
ITM2C-208	ENST00000541852	SCAF4	O95104	1147 aa	Known RBP	11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	SDC2	P34741	201 aa		11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	ZNF585B	Q52M93	769 aa		11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	SPSB3	Q6PJ21	355 aa		11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	DMBX1	Q8NFW5	382 aa		11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	OR5AP2	Q8NGF4	316 aa		11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	ZNF502	Q8TBZ5	544 aa		11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	CACNG8	Q8WXS5	425 aa		11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	SPAG8	Q99932	426 aa	Predicted RBP	11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	OVOL2	Q9BRP0	275 aa		11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	QTRT1	Q9BXR0	403 aa	Known RBP	11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.17	□□□□□ -0.62
ITM2C-208	ENST00000541852	IGLC7	A0M8Q6	106 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	CGB1	A6NKQ9	187 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	SULT1C2	O00338	296 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	TNFSF12	O43508	249 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	REG1A	P05451	166 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	TRAPPC2	P0DI81	140 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	TRAPPC2B	P0DI82	140 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	ATF4	P18848	351 aa	Predicted RBP	11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	EDN2	P20800	178 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	BMI1	P35226	326 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	ERVK-16	P61578	105 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	BTNL8	Q6UX41	500 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	C19orf35	Q6ZS72	473 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	OR1L8	Q8NGR8	309 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	BSCL2	Q96G97	398 aa	Predicted RBP	11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	COMMD9	Q9P000	198 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852		S4R3C0	116 aa		11.16	□□□□□ -0.62
ITM2C-208	ENST00000541852	KIR2DL5B	A0A0G2JN68	375 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	KIR2DL5B	A0A0G2JPC4	375 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	MFSD2B	A6NFX1	497 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	TSPAN4	O14817	238 aa		11.15	□□□□□ -0.62
ITM2C-208	ENST00000541852	TGOLN2	O43493	480 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms