RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 UBE2NLQ5JXB2 153 aa9.91□□□□□ -0.82
SEMA4D-223ENST00000540475 CD300LFQ8TDQ1 290 aa9.91□□□□□ -0.82
SEMA4D-223ENST00000540475 BORCS5Q969J3 196 aa9.91□□□□□ -0.82
SEMA4D-223ENST00000540475 CCDC140Q96MF4 163 aa9.91□□□□□ -0.82
SEMA4D-223ENST00000540475 FBXL7Q9UJT9 491 aa9.91□□□□□ -0.82
SEMA4D-223ENST00000540475 TENM2Q9NT68 2774 aa9.91□□□□□ -0.82
SEMA4D-223ENST00000540475 A0A087WXM4 84 aa9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 IGLC7A0M8Q6 106 aa9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 C2orf70A6NJV1 201 aa9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 PPP5D1E7EU14 171 aa9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 MYOD1P15172 320 aa9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 HAGHQ16775 308 aa9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 CD300EQ496F6 205 aaPredicted RBP9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 C19orf35Q6ZS72 473 aa9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 GTSCR1Q86UQ5 136 aa9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 MOB3AQ96BX8 217 aa9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 CMTM3Q96MX0 182 aa9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 TECRQ9NZ01 308 aaKnown RBP9.9□□□□□ -0.82
SEMA4D-223ENST00000540475 TRAV3A0A0B4J244 114 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 DPPA5A6NC42 116 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 A8MWP6 167 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 OR2C1O95371 312 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 FOLR2P14207 255 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 TAS2R20P59543 309 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 SSX9Q7RTT3 188 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 LYSMD2Q8IV50 215 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 TSPAN14Q8NG11 270 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 SLC25A46Q96AG3 418 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 SPATA25Q9BR10 227 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 COMMD9Q9P000 198 aa9.89□□□□□ -0.83
SEMA4D-223ENST00000540475 HYDINQ4G0P3 5121 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 TRBV7-1A0A0A6YYK4 115 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 PGLYRP1O75594 196 aaPredicted RBP9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 TNFAIP8O95379 198 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 C8orf88P0DMB2 117 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 CBLN1P23435 193 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 F2RP25116 425 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 RFX2P48378 723 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 FXYD4P59646 89 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 TMEM69Q5SWH9 247 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 THOC7Q6I9Y2 204 aaKnown RBP9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 CLEC19AQ6UXS0 136 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 SAMD12Q8N8I0 201 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 GPX8Q8TED1 209 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 EEF1AKMT3Q96AZ1 226 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 CXorf58Q96LI9 332 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 FAM212BQ9NTI7 297 aaPredicted RBP9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 TMEM140Q9NV12 185 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 EHFQ9NZC4 300 aa9.88□□□□□ -0.83
SEMA4D-223ENST00000540475 TMEM213A2RRL7 107 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 MEIS3P1A6NDR6 274 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 S1PR2O95136 353 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 HLA-AP01891 365 aaKnown RBP9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 FCER2P06734 321 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 EDN2P20800 178 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 PTBP1P26599 531 aaKnown RBP eCLIP9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 PRSS3P35030 304 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 ARL3P36405 182 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 TAS2R46P59540 309 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 HERV-K104P61576 105 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 ZNF585BQ52M93 769 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 HSD17B13Q7Z5P4 300 aaPredicted RBP9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 ZNF502Q8TBZ5 544 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 ATP6V0BQ99437 205 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 NEURL2Q9BR09 285 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 ZNF2Q9BSG1 426 aaPredicted RBP9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 QTRT1Q9BXR0 403 aaKnown RBP9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 COMMD5Q9GZQ3 224 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 HRASLSQ9HDD0 168 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 VCX3AQ9NNX9 186 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 IFT46Q9NQC8 304 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 NDUFA4L2Q9NRX3 87 aa9.87□□□□□ -0.83
SEMA4D-223ENST00000540475 TEX50A0A1B0GTY4 177 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 MFSD2BA6NFX1 497 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 APOA1P02647 267 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 REG1AP05451 166 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 CLEC3BP05452 202 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 SERPINE2P07093 398 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 DEFA4P12838 97 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 LYL1P12980 280 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 ELLP55199 621 aaPredicted RBP9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 CD81P60033 236 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 FAM106AQ4KMX7 169 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 AADACL3Q5VUY0 350 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 TMEM17Q86X19 198 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 OR6F1Q8NGZ6 308 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 OR51H1Q8NH63 302 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 VN1R17PQ8TDU5 208 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 DGCR14Q96DF8 476 aaKnown RBP9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 ZNF436Q9C0F3 470 aaPredicted RBP9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 TUBA4BQ9H853 241 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 SCPEP1Q9HB40 452 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 SLC2A8Q9NY64 477 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 THYN1Q9P016 225 aa9.86□□□□□ -0.83
SEMA4D-223ENST00000540475 RBMY1BA6NDE4 496 aaKnown RBP9.85□□□□□ -0.83
SEMA4D-223ENST00000540475 RBMY1EA6NEQ0 496 aaKnown RBP9.85□□□□□ -0.83
SEMA4D-223ENST00000540475 MARCH11A6NNE9 402 aa9.85□□□□□ -0.83
SEMA4D-223ENST00000540475 TPPPO94811 219 aa9.85□□□□□ -0.83
SEMA4D-223ENST00000540475 IGHV3-23P01764 117 aa9.85□□□□□ -0.83
SEMA4D-223ENST00000540475 PMP2P02689 132 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms