RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 RBPMS2Q6ZRY4 209 aaKnown RBP8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 Q6ZWC4 215 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 ZBTB34Q8NCN2 500 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 OR1L6Q8NGR2 347 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 ZNF502Q8TBZ5 544 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 SPAG8Q99932 426 aaPredicted RBP8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 THYN1Q9P016 225 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 UFC1Q9Y3C8 167 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 S4R3C0 116 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 MFSD2BA6NFX1 497 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 SSX5O60225 188 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 MRPS14O60783 128 aaKnown RBP8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 MYOD1P15172 320 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 ATF4P18848 351 aaPredicted RBP8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 PTBP1P26599 531 aaKnown RBP eCLIP8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 FGF9P31371 208 aaPredicted RBP8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 BMI1P35226 326 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 APOC4P55056 127 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 TAS2R31P59538 309 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 TNFRSF9Q07011 255 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 POU2AF1Q16633 256 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 TIMM50Q3ZCQ8 353 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 UNQ9165/PRO28630Q6UXU0 137 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 SSX9Q7RTT3 188 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 TPRA1Q86W33 373 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 SLC38A6Q8IZM9 456 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 OR2C3Q8N628 320 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 ZNF436Q9C0F3 470 aaPredicted RBP8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 VCX3BQ9H321 246 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 C5orf66Q9H5L9 145 aa8.95□□□□□ -0.98
CBX3P4-202ENST00000540428 IGLC7A0M8Q6 106 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 CXorf65A6NEN9 183 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 UBE2CO00762 179 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 CYB5BO43169 146 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 LY6G6CO95867 125 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 HPRT1P00492 218 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 REG1AP05451 166 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 GPR183P32249 361 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 HSPA13P48723 471 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 OR2B8PP59922 312 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 CATR1Q13166 79 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 ZNF585BQ52M93 769 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 THOC7Q6I9Y2 204 aaKnown RBP8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 PLET1Q6UQ28 207 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 SPAG16Q8N0X2 631 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 OR13F1Q8NGS4 319 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 VN1R17PQ8TDU5 208 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 HRASLSQ9HDD0 168 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 CCL28Q9NRJ3 127 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 SELENOKQ9Y6D0 94 aa8.94□□□□□ -0.98
CBX3P4-202ENST00000540428 KIR2DL5BA0A0G2JN68 375 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 KIR2DL5BA0A0G2JPC4 375 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 A0A0J9YWU9 116 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 SMIM30A4D0T7 59 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 UPK2O00526 184 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 TSPAN4O14817 238 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 TGOLN2O43493 480 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 TNFSF12O43508 249 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 SPRY2O43597 315 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 PPYP01298 95 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 NQO2P16083 231 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 FCGR2CP31995 323 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 SCAND1P57086 179 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 ARPC4P59998 168 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 GABARAPL2P60520 117 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 CEMP1Q6PRD7 247 aaPredicted RBP8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 HSD17B13Q7Z5P4 300 aaPredicted RBP8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 LYG2Q86SG7 212 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 KIR2DL5AQ8N109 375 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 BEST4Q8NFU0 473 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 KIR2DL5BQ8NHK3 375 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 CD300LFQ8TDQ1 290 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 SECTM1Q8WVN6 248 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 TMEM190Q8WZ59 177 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 ATP6V0BQ99437 205 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 COMMD5Q9GZQ3 224 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 TXNL4BQ9NX01 149 aaKnown RBP8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 RHBDL2Q9NX52 303 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 DAPK2Q9UIK4 370 aa8.93□□□□□ -0.98
CBX3P4-202ENST00000540428 PMS2P11Q13670 270 aa8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 UBE2UQ5VVX9 321 aa8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 LAMTOR1Q6IAA8 161 aa8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 SFXN4Q6P4A7 337 aa8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 SPSB3Q6PJ21 355 aa8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 HOGA1Q86XE5 327 aa8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 TMEM217Q8N7C4 229 aa8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 LGALS14Q8TCE9 139 aa8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 BSCL2Q96G97 398 aaPredicted RBP8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 CNBD2Q96M20 576 aa8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 GPHA2Q96T91 129 aa8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 QTRT1Q9BXR0 403 aaKnown RBP8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 PLEKHA2Q9HB19 425 aa8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 DAZ1Q9NQZ3 744 aaKnown RBP8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 KLK5Q9Y337 293 aaPredicted RBP8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 RRP15Q9Y3B9 282 aaKnown RBP8.92□□□□□ -0.98
CBX3P4-202ENST00000540428 A0A0A6YYH2 397 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 TRAV3A0A0B4J244 114 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 A6NJ64 397 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 ANKRD65E5RJM6 399 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 SULT1C2O00338 296 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms