RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 NDUFA3O95167 84 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 HSPE1P61604 102 aaKnown RBP12.91□□□□□ -0.34
TRAF3-204ENST00000539721 DEFB112Q30KQ8 113 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 C9orf139Q6ZV77 190 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 IL17RELQ6ZVW7 336 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 PPP1R27Q86WC6 154 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 MMD2Q8IY49 270 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 ZDHHC16Q969W1 377 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 CLCC1Q96S66 551 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 COMMD5Q9GZQ3 224 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 TNFSF18Q9UNG2 199 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 TCF19Q9Y242 345 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 CSPG4Q6UVK1 2322 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 KCNAB3O43448 404 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 OR2F2O95006 317 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 OPN1MWP04001 364 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 FGF2P09038 288 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 OPN1MW2P0DN77 364 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 OPN1MW3P0DN78 364 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 NUP62P37198 522 aaPredicted RBP12.9□□□□□ -0.34
TRAF3-204ENST00000539721 PJVKQ0ZLH3 352 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 PRSS8Q16651 343 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 SPNS3Q6ZMD2 512 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 INO80EQ8NBZ0 244 aaPredicted RBP12.9□□□□□ -0.34
TRAF3-204ENST00000539721 DTD1Q8TEA8 209 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 RAB40CQ96S21 281 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 HINT2Q9BX68 163 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 C11orf1Q9H5F2 150 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 C1RLQ9NZP8 487 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 ZNF257Q9Y2Q1 563 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 CELSR1Q9NYQ6 3014 aa12.9□□□□□ -0.34
TRAF3-204ENST00000539721 TEX50A0A1B0GTY4 177 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 H3BUX3 64 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 P2RY1P47900 373 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 TNXAQ16473 311 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 AANATQ16613 207 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 MRGPRG-AS1Q2M3A8 158 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 C9orf62Q8N4C0 152 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 OR8H1Q8NGG4 311 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 OR5B3Q8NH48 314 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 PIFOQ8TCI5 191 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 MFFQ9GZY8 342 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 PLSCR3Q9NRY6 295 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 GPR137BO60478 399 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 ACTL6BO94805 426 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 CXCL2P19875 107 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 MAS1LP35410 378 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 SRP14P37108 136 aaKnown RBP12.89□□□□□ -0.35
TRAF3-204ENST00000539721 HOXA1P49639 335 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-204ENST00000539721 AP2S1P53680 142 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-204ENST00000539721 RPL23AP62750 156 aaKnown RBP12.89□□□□□ -0.35
TRAF3-204ENST00000539721 GNB1P62873 340 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 C5orf64Q2M2E5 130 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 PDLIM3Q53GG5 364 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-204ENST00000539721 OR1L8Q8NGR8 309 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 PSENENQ9NZ42 101 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 HSPB11Q9Y547 144 aa12.89□□□□□ -0.35
TRAF3-204ENST00000539721 TNCP24821 2201 aa12.88□□□□□ -0.35
TRAF3-204ENST00000539721 TMEM50AO95807 157 aa12.88□□□□□ -0.35
TRAF3-204ENST00000539721 CAV2P51636 162 aa12.88□□□□□ -0.35
TRAF3-204ENST00000539721 PAX9P55771 341 aa12.88□□□□□ -0.35
TRAF3-204ENST00000539721 PRCDQ00LT1 54 aa12.88□□□□□ -0.35
TRAF3-204ENST00000539721 LGALSLQ3ZCW2 172 aaPredicted RBP12.88□□□□□ -0.35
TRAF3-204ENST00000539721 LAMTOR1Q6IAA8 161 aa12.88□□□□□ -0.35
TRAF3-204ENST00000539721 ACOT7LQ6ZUV0 252 aa12.88□□□□□ -0.35
TRAF3-204ENST00000539721 SMIM8Q96KF7 97 aa12.88□□□□□ -0.35
TRAF3-204ENST00000539721 CIB3Q96Q77 187 aaPredicted RBP12.88□□□□□ -0.35
TRAF3-204ENST00000539721 ENY2Q9NPA8 101 aa12.88□□□□□ -0.35
TRAF3-204ENST00000539721 ZC4H2Q9NQZ6 224 aa12.88□□□□□ -0.35
TRAF3-204ENST00000539721 WSB1Q9Y6I7 421 aa12.88□□□□□ -0.35
TRAF3-204ENST00000539721 RNF222A6NCQ9 220 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 MSGN1A6NI15 193 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 H3BP45 60 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 FCN1O00602 326 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 CA2P00918 260 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 HNF1AP20823 631 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 RPL12P30050 165 aaKnown RBP12.87□□□□□ -0.35
TRAF3-204ENST00000539721 TAS2R30P59541 319 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 LY6EQ16553 131 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 C10orf55Q5SWW7 151 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 TMEM219Q86XT9 240 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 OR2C3Q8N628 320 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 RBM14Q96PK6 669 aaKnown RBP12.87□□□□□ -0.35
TRAF3-204ENST00000539721 SMR3AQ99954 134 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 SLC25A33Q9BSK2 321 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 PLEKHA3Q9HB20 300 aa12.87□□□□□ -0.35
TRAF3-204ENST00000539721 HEYLQ9NQ87 328 aaPredicted RBP12.87□□□□□ -0.35
TRAF3-204ENST00000539721 LYRM2Q9NU23 88 aaPredicted RBP12.87□□□□□ -0.35
TRAF3-204ENST00000539721 FAM24AA6NFZ4 105 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 HKR1P10072 659 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 RPL27AP46776 148 aaKnown RBP12.86□□□□□ -0.35
TRAF3-204ENST00000539721 OR2F1Q13607 317 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 Q8N9W7 124 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 AQP10Q96PS8 301 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 RASL11BQ9BPW5 248 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 HIPK2Q9H2X6 1198 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 NDUFA4L2Q9NRX3 87 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 PITPNC1Q9UKF7 332 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 MOB4Q9Y3A3 225 aa12.86□□□□□ -0.35
TRAF3-204ENST00000539721 FLNBO75369 2602 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms