RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 SLC39A9Q9NUM3 307 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 FAM96BQ9Y3D0 163 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 MYO18BQ8IUG5 2567 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 DSCAMO60469 2012 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 ZNF462Q96JM2 2506 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 PPIAL4CA0A0B4J2A2 164 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 MAP1LC3B2A6NCE7 125 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 M0R1W7 72 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 SCO1O75880 301 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 PPIAL4GP0DN37 164 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 MDKP21741 143 aaPredicted RBP8.29□□□□□ -1.08
SPARC-209ENST00000539687 MAS1LP35410 378 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 CEACAM3P40198 252 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 OPRK1P41145 380 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 LINC00205P59089 165 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 RPL8P62917 257 aaKnown RBP8.29□□□□□ -1.08
SPARC-209ENST00000539687 SRSF3P84103 164 aaKnown RBP8.29□□□□□ -1.08
SPARC-209ENST00000539687 RHEBQ15382 184 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 TMEM249Q2WGJ8 235 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 SOHLH1Q5JUK2 328 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 WDR25Q64LD2 544 aaPredicted RBP8.29□□□□□ -1.08
SPARC-209ENST00000539687 ZNF841Q6ZN19 808 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 KIR3DL3Q8N743 410 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 CLRN3Q8NCR9 226 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 LY6G5BQ8NDX9 201 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 OR1L8Q8NGR8 309 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 TMEM167AQ8TBQ9 72 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 MAP1LC3BQ9GZQ8 125 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 PATZ1Q9HBE1 687 aaKnown RBP8.29□□□□□ -1.08
SPARC-209ENST00000539687 MANBALQ9NQG1 85 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 RPRMQ9NS64 109 aa8.29□□□□□ -1.08
SPARC-209ENST00000539687 DSCAML1Q8TD84 2053 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 IGHV2-26A0A0B4J1V2 119 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 LCE2BO14633 110 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 SAA1P0DJI8 122 aaPredicted RBP8.28□□□□□ -1.08
SPARC-209ENST00000539687 PAX6P26367 422 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 COMPP49747 757 aaPredicted RBP8.28□□□□□ -1.08
SPARC-209ENST00000539687 SRSF1Q07955 248 aaKnown RBP eCLIP8.28□□□□□ -1.08
SPARC-209ENST00000539687 HLA-DRB5Q30154 266 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 C2orf83Q53S99 150 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 FFAR4Q5NUL3 377 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 SP5Q6BEB4 398 aaPredicted RBP8.28□□□□□ -1.08
SPARC-209ENST00000539687 C1orf229Q6ZS94 237 aaPredicted RBP8.28□□□□□ -1.08
SPARC-209ENST00000539687 C1orf122Q6ZSJ8 110 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 VKORC1L1Q8N0U8 176 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 TEX45Q8NA69 505 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 OR10G9Q8NGN4 311 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 OR10G7Q8NGN6 311 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 CLDND2Q8NHS1 167 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 RCC1LQ96I51 464 aaKnown RBP8.28□□□□□ -1.08
SPARC-209ENST00000539687 SSBP3Q9BWW4 388 aaPredicted RBP8.28□□□□□ -1.08
SPARC-209ENST00000539687 SCRT1Q9BWW7 348 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 MS4A7Q9GZW8 240 aaPredicted RBP8.28□□□□□ -1.08
SPARC-209ENST00000539687 VAX2Q9UIW0 290 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 PRR14LQ5THK1 2151 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 ATMQ13315 3056 aa8.28□□□□□ -1.08
SPARC-209ENST00000539687 CFAP46Q8IYW2 2715 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 LOC102723971A0A1B0GUV8 181 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 SMCO3A2RU48 225 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 FCN3O75636 299 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 MT-CO2P00403 227 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 F12P00748 615 aaPredicted RBP8.27□□□□□ -1.09
SPARC-209ENST00000539687 IGLV1-47P01700 117 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 IGKV1-16P04430 117 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 BCL2P10415 239 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 GNLYP22749 145 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 GPX4P36969 197 aaPredicted RBP8.27□□□□□ -1.09
SPARC-209ENST00000539687 GPR6P46095 362 aaPredicted RBP8.27□□□□□ -1.09
SPARC-209ENST00000539687 PSMB3P49720 205 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 ELLP55199 621 aaPredicted RBP8.27□□□□□ -1.09
SPARC-209ENST00000539687 RPS16P62249 146 aaKnown RBP8.27□□□□□ -1.09
SPARC-209ENST00000539687 PNRC1Q12796 327 aaPredicted RBP8.27□□□□□ -1.09
SPARC-209ENST00000539687 CDSNQ15517 529 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 GUCA2BQ16661 112 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 TEPPQ6URK8 271 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 MMD2Q8IY49 270 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.27□□□□□ -1.09
SPARC-209ENST00000539687 NANPQ8TBE9 248 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 CACNG8Q8WXS5 425 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 RPEQ96AT9 228 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 TXNDC17Q9BRA2 123 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 SMCO4Q9NRQ5 59 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 TMA7Q9Y2S6 64 aaKnown RBP8.27□□□□□ -1.09
SPARC-209ENST00000539687 CADP27708 2225 aa8.27□□□□□ -1.09
SPARC-209ENST00000539687 LOC105371242A0A075B767 164 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 TRAV3A0A0B4J244 114 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 TEX50A0A1B0GTY4 177 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 A0A1W2PPV4 95 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 OOSP1A8MZH6 123 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 SEC14L6B5MCN3 397 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 PRSS46E5RG02 174 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 BUB1B-PAK6H3BSN5 160 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 DNASE2O00115 360 aaPredicted RBP8.26□□□□□ -1.09
SPARC-209ENST00000539687 CORTO00230 105 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 RRHO14718 337 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 ACTL6BO94805 426 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 SOD3P08294 240 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 CDC34P49427 236 aaPredicted RBP8.26□□□□□ -1.09
SPARC-209ENST00000539687 EFNA4P52798 201 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 BSXQ3C1V8 233 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms