RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 EDDM3AQ14507 147 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 TMEM30BQ3MIR4 351 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 COA6Q5JTJ3 125 aaKnown RBP7.29□□□□□ -1.24
DDB1-213ENST00000539332 DUX4L9Q6RFH8 374 aaPredicted RBP7.29□□□□□ -1.24
DDB1-213ENST00000539332 CMTM1Q8IZ96 169 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 HSD17B11Q8NBQ5 300 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 UBALD1Q8TB05 177 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 IL22RA2Q969J5 263 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 DCTN5Q9BTE1 182 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 PPIAL4AQ9Y536 164 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 WNK2Q9Y3S1 2297 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 NBPF19A0A087WUL8 3843 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 A8MWP6 167 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 LYNX1G3V0Z9 82 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 YPEL1O60688 119 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 TRGC2P03986 189 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 TRGC1P0CF51 173 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 LYNX1P0DP58 116 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 NDUFB7P17568 137 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 COL8A2P25067 703 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 F2RP25116 425 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 FHITP49789 147 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 LOXL3P58215 753 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 NUTF2P61970 127 aaKnown RBP7.28□□□□□ -1.24
DDB1-213ENST00000539332 MRPS11P82912 194 aaKnown RBP7.28□□□□□ -1.24
DDB1-213ENST00000539332 ICAM4Q14773 271 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 C17orf58Q2M2W7 97 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 SP6Q3SY56 376 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 SPSB3Q6PJ21 355 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 DRAM1Q8N682 238 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 FAM216BQ8N7L0 139 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 DEFB108BQ8NET1 73 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 OR52L2PQ8NGH6 319 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 OR4D5Q8NGN0 318 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 RNF125Q96EQ8 232 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 C5orf30Q96GV9 206 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 ACY3Q96HD9 319 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 YPEL2Q96QA6 119 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 P2RX4Q99571 388 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 CCL13Q99616 98 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 CCL19Q99731 98 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 HIST1H2BLQ99880 126 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 SH3BGRL3Q9H299 93 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 RNF150Q9ULK6 438 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 TGIF2-C20orf24A0A0A6YYL0 155 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 PHF1O43189 567 aaPredicted RBP7.28□□□□□ -1.24
DDB1-213ENST00000539332 NDUFS7O75251 213 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 ATP6V0CP27449 155 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 S100GP29377 79 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 ERVFRD-1P60508 538 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 MEF2CQ06413 473 aaPredicted RBP7.28□□□□□ -1.24
DDB1-213ENST00000539332 USF2Q15853 346 aaPredicted RBP7.28□□□□□ -1.24
DDB1-213ENST00000539332 PET117Q6UWS5 81 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 ZNF645Q8N7E2 425 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 RARRES2Q99969 163 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 AGMATQ9BSE5 352 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 RAB9BQ9NP90 201 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 CALYQ9NYX4 217 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 VAX2Q9UIW0 290 aa7.28□□□□□ -1.24
DDB1-213ENST00000539332 RCL1Q9Y2P8 373 aaKnown RBP7.28□□□□□ -1.24
DDB1-213ENST00000539332 KBTBD11-OT1A0A1B0GTJ5 212 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 LOC102723971A0A1B0GUV8 181 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 XKRY2A2RUG3 117 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 PPP5D1E7EU14 171 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 M0QZK8 103 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 GGCTO75223 188 aaKnown RBP7.27□□□□□ -1.25
DDB1-213ENST00000539332 IFNA1P01562 189 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 ARL3P36405 182 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 EFNA4P52798 201 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 EDDM3BP56851 147 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 SRSF2Q01130 221 aaKnown RBP7.27□□□□□ -1.25
DDB1-213ENST00000539332 NMSQ5H8A3 153 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 ZNF787Q6DD87 383 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 FAM53AQ6NSI3 398 aaPredicted RBP7.27□□□□□ -1.25
DDB1-213ENST00000539332 LYZL2Q7Z4W2 148 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 SELENOHQ8IZQ5 122 aaKnown RBP7.27□□□□□ -1.25
DDB1-213ENST00000539332 CYB561D1Q8N8Q1 229 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 OR10A7Q8NGE5 316 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 OR52M1Q8NGK5 317 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 CLDND2Q8NHS1 167 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 NRGNQ92686 78 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 SRD5A3Q9H8P0 318 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 LYRM2Q9NU23 88 aaPredicted RBP7.27□□□□□ -1.25
DDB1-213ENST00000539332 CLN8Q9UBY8 286 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 UBE2J1Q9Y385 318 aaPredicted RBP7.27□□□□□ -1.25
DDB1-213ENST00000539332 LINC00312Q9Y6C7 94 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 NOTCH2Q04721 2471 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 FLNBO75369 2602 aaKnown RBP7.27□□□□□ -1.25
DDB1-213ENST00000539332 CREBBPQ92793 2442 aa7.27□□□□□ -1.25
DDB1-213ENST00000539332 TRGV10A0A0A0MS01 117 aa7.26□□□□□ -1.25
DDB1-213ENST00000539332 A0A1B0GU03 582 aa7.26□□□□□ -1.25
DDB1-213ENST00000539332 ZNF727A8MUV8 499 aa7.26□□□□□ -1.25
DDB1-213ENST00000539332 RPL23AP62750 156 aaKnown RBP7.26□□□□□ -1.25
DDB1-213ENST00000539332 MORN2Q502X0 79 aa7.26□□□□□ -1.25
DDB1-213ENST00000539332 HIST2H2BCQ6DN03 193 aa7.26□□□□□ -1.25
DDB1-213ENST00000539332 CDPF1Q6NVV7 123 aa7.26□□□□□ -1.25
DDB1-213ENST00000539332 FGFRL1Q8N441 504 aa7.26□□□□□ -1.25
DDB1-213ENST00000539332 TCTEX1D1Q8N7M0 179 aa7.26□□□□□ -1.25
DDB1-213ENST00000539332 SLC35G3Q8N808 338 aa7.26□□□□□ -1.25
DDB1-213ENST00000539332 ZNF439Q8NDP4 499 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms