RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 IFITM5A6NNB3 132 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A23PA8MXZ1 464 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 XRCC3O43542 346 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 PROP1O75360 226 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 FBXO24O75426 580 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 IGKV1D-33P01593 117 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 IGKV1-33P01594 117 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 SCTP09683 121 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 CNTFRP26992 372 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 PPT1P50897 306 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 F2RL1P55085 397 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 TAS2R19P59542 299 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 NUTF2P61970 127 aaKnown RBP5.72□□□□□ -1.49
LMO3-220ENST00000539232 HAGHQ16775 308 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 NSUN5P1Q3KNT7 163 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 MORN2Q502X0 79 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 TMEM69Q5SWH9 247 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 ZNF880Q6PDB4 577 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 LCNL1Q6ZST4 164 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 SLC25A48Q6ZT89 311 aaKnown RBP5.72□□□□□ -1.49
LMO3-220ENST00000539232 ZNF329Q86UD4 541 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 ZFP82Q8N141 532 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 ARRDC1Q8N5I2 433 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 LINC00311Q8N616 119 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 TERB2Q8NHR7 220 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 KCNG3Q8TAE7 436 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 RTN4IP1Q8WWV3 396 aaPredicted RBP5.72□□□□□ -1.49
LMO3-220ENST00000539232 WDR89Q96FK6 387 aaPredicted RBP5.72□□□□□ -1.49
LMO3-220ENST00000539232 EAF1Q96JC9 268 aaPredicted RBP5.72□□□□□ -1.49
LMO3-220ENST00000539232 PECRQ9BY49 303 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 MRPL20Q9BYC9 149 aaKnown RBP5.72□□□□□ -1.49
LMO3-220ENST00000539232 GPR61Q9BZJ8 451 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 PRSS22Q9GZN4 317 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 SPACA1Q9HBV2 294 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 OR2S2Q9NQN1 319 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 V9GY05 133 aa5.72□□□□□ -1.49
LMO3-220ENST00000539232 DOCK11Q5JSL3 2073 aa5.71□□□□□ -1.49
LMO3-220ENST00000539232 A0A1B0GV90 55 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 A0A1B0GW64 132 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 CXorf65A6NEN9 183 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 G3V4G9 280 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 M0QZK8 103 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 SPINT2O43291 252 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 GGCTO75223 188 aaKnown RBP5.71□□□□□ -1.5
LMO3-220ENST00000539232 LYL1P12980 280 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 GNB3P16520 340 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 BRS3P32247 399 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 VDAC2P45880 294 aaPredicted RBP5.71□□□□□ -1.5
LMO3-220ENST00000539232 UBE2MP61081 183 aaKnown RBP5.71□□□□□ -1.5
LMO3-220ENST00000539232 DLK1P80370 383 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 ZNF816Q0VGE8 651 aaPredicted RBP5.71□□□□□ -1.5
LMO3-220ENST00000539232 EBI3Q14213 229 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 HES1Q14469 280 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 RPL39P5Q59GN2 51 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 C9orf152Q5JTZ5 239 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 LIAT1Q6ZQX7 453 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 C5orf56Q8N8D9 126 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 TMEM229BQ8NBD8 167 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 OR5AU1Q8NGC0 362 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 OR10A7Q8NGE5 316 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 OR5AP2Q8NGF4 316 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 OR52M1Q8NGK5 317 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 LYPD6BQ8NI32 183 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 LGALS14Q8TCE9 139 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 IL1F10Q8WWZ1 152 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 C5orf30Q96GV9 206 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 HSPB9Q9BQS6 159 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 NMES1Q9C002 83 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 CST11Q9H112 138 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 IFI27L2Q9H2X8 130 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 AUNIPQ9H7T9 357 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 RAB18Q9NP72 206 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 PARP11Q9NR21 331 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 CACFD1Q9UGQ2 172 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 STEAP1Q9UHE8 339 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 ZNF230Q9UIE0 474 aaPredicted RBP5.71□□□□□ -1.5
LMO3-220ENST00000539232 RNF150Q9ULK6 438 aa5.71□□□□□ -1.5
LMO3-220ENST00000539232 SAA2-SAA4A0A096LPE2 208 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 OOSP1A8MZH6 123 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 C3orf84H3BNL1 204 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 RAB27BO00194 218 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 GAPDHP04406 335 aaKnown RBP5.7□□□□□ -1.5
LMO3-220ENST00000539232 RLN1P04808 185 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 OR4E1P0C645 316 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 SFTA3P0C7M3 94 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 METTL15P1P0C7V9 234 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 FAM106CPP0CH98 169 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 PET100P0DJ07 73 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 SAA2P0DJI9 122 aaPredicted RBP5.7□□□□□ -1.5
LMO3-220ENST00000539232 TMEM11P17152 192 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 CEACAM3P40198 252 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 ZNF137PP52743 207 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 TAS2R20P59543 309 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 COTL1Q14019 142 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 MEF2DQ14814 521 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 LY6G6FQ5SQ64 297 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 SAMD5Q5TGI4 173 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 THNSL2Q86YJ6 484 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 C8orf31Q8N9H6 132 aa5.7□□□□□ -1.5
LMO3-220ENST00000539232 Q8N9W7 124 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms