RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PTHLHP12272 177 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 HIST1H1BP16401 226 aaKnown RBP9.39□□□□□ -0.91
VAMP1-206ENST00000538970 HLA-GP17693 338 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 FCGR2CP31995 323 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 SLC16A13Q7RTY0 426 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 HOGA1Q86XE5 327 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 BEST4Q8NFU0 473 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 OR13F1Q8NGS4 319 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 OR4A5Q8NH83 315 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 SECTM1Q8WVN6 248 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 SLC25A38Q96DW6 304 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 MLXQ9UH92 298 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 SSR3Q9UNL2 185 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 SELENOKQ9Y6D0 94 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 ALMS1Q8TCU4 4167 aa9.39□□□□□ -0.91
VAMP1-206ENST00000538970 PLECQ15149 4684 aaKnown RBP9.38□□□□□ -0.91
VAMP1-206ENST00000538970 MFSD2BA6NFX1 497 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 RBFOX2O43251 390 aaKnown RBP eCLIP9.38□□□□□ -0.918e-6■■□□□ 11.5
VAMP1-206ENST00000538970 PPYP01298 95 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 CLEC2LP0C7M8 214 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 SDC2P34741 201 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 SCAND1P57086 179 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 OR2B8PP59922 312 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 FAM106AQ4KMX7 169 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 ZNF57Q68EA5 555 aaPredicted RBP9.38□□□□□ -0.91
VAMP1-206ENST00000538970 SPAG16Q8N0X2 631 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 GVQW1Q8N7I0 195 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 ZBTB34Q8NCN2 500 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 OR5H6Q8NGV6 325 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 ETV7Q9Y603 341 aa9.38□□□□□ -0.91
VAMP1-206ENST00000538970 TRAV18A0A075B6X5 111 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 TRBV7-1A0A0A6YYK4 115 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 IGLC7A0M8Q6 106 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 ZNF320A2RRD8 509 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 DEFA4P12838 97 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 TAS2R31P59538 309 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 MXD1Q05195 221 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 POU2AF1Q16633 256 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 ZNF773Q6PK81 442 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 BTNL8Q6UX41 500 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 UNQ9165/PRO28630Q6UXU0 137 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 UXS1Q8NBZ7 420 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 OR52B4Q8NGK2 314 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 CXorf58Q96LI9 332 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 AIFM2Q9BRQ8 373 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 SLC5A7Q9GZV3 580 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 RNF167Q9H6Y7 350 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 HRASLSQ9HDD0 168 aa9.37□□□□□ -0.91
VAMP1-206ENST00000538970 A0A0A6YYH2 397 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 TRAV3A0A0B4J244 114 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 A6NJ64 397 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 SULT1C2O00338 296 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 UPK2O00526 184 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
VAMP1-206ENST00000538970 HPRT1P00492 218 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 CLEC3BP05452 202 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 NQO2P16083 231 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 GPR183P32249 361 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 CATR1Q13166 79 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 IDNKQ5T6J7 187 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 ZNF502Q8TBZ5 544 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 GGTLC1Q9BX51 225 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 AUNIPQ9H7T9 357 aa9.36□□□□□ -0.91
VAMP1-206ENST00000538970 S1PR2O95136 353 aa9.35□□□□□ -0.91
VAMP1-206ENST00000538970 FGF2P09038 288 aa9.35□□□□□ -0.91
VAMP1-206ENST00000538970 C8orf88P0DMB2 117 aa9.35□□□□□ -0.91
VAMP1-206ENST00000538970 FXYD4P59646 89 aa9.35□□□□□ -0.91
VAMP1-206ENST00000538970 TM4SF20Q53R12 229 aa9.35□□□□□ -0.91
VAMP1-206ENST00000538970 ZNF818PQ6ZRF7 136 aa9.35□□□□□ -0.91
VAMP1-206ENST00000538970 MARC2Q969Z3 335 aa9.35□□□□□ -0.91
VAMP1-206ENST00000538970 SRSF8Q9BRL6 282 aaKnown RBP9.35□□□□□ -0.91
VAMP1-206ENST00000538970 COMMD5Q9GZQ3 224 aa9.35□□□□□ -0.91
VAMP1-206ENST00000538970 TMEM140Q9NV12 185 aa9.35□□□□□ -0.91
VAMP1-206ENST00000538970 RYR1P21817 5038 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 LOC102724200A0A096LPH7 203 aaPredicted RBP9.34□□□□□ -0.91
VAMP1-206ENST00000538970 TRAV25A0A0B4J276 109 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 LOC100506127A0A0U1RQW1 187 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 FCER2P06734 321 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 PTBP1P26599 531 aaKnown RBP eCLIP9.34□□□□□ -0.91
VAMP1-206ENST00000538970 ELLP55199 621 aaPredicted RBP9.34□□□□□ -0.91
VAMP1-206ENST00000538970 ANKRD55Q3KP44 614 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 AADACL3Q5VUY0 350 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 TMEM17Q86X19 198 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 OR5AP2Q8NGF4 316 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 OR51H1Q8NH63 302 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 GIMAP1Q8WWP7 306 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 OVOL2Q9BRP0 275 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 QTRT1Q9BXR0 403 aaKnown RBP9.34□□□□□ -0.91
VAMP1-206ENST00000538970 YTHDF1Q9BYJ9 559 aaKnown RBP9.34□□□□□ -0.91
VAMP1-206ENST00000538970 ZNF436Q9C0F3 470 aaPredicted RBP9.34□□□□□ -0.91
VAMP1-206ENST00000538970 Q9H521 79 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 PLEKHA2Q9HB19 425 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 COMMD9Q9P000 198 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 THYN1Q9P016 225 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 MRPL27Q9P0M9 148 aaKnown RBP9.34□□□□□ -0.91
VAMP1-206ENST00000538970 UFC1Q9Y3C8 167 aa9.34□□□□□ -0.91
VAMP1-206ENST00000538970 IGHV3-35A0A0C4DH35 117 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 MEIS3P1A6NDR6 274 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 TGOLN2O43493 480 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 ATP6V1G2O95670 118 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms