RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 OR2F2O95006 317 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 MAS1LP35410 378 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SNCAP37840 140 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 DYNLT3P51808 116 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RIPPLY3P57055 190 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SPCS3P61009 180 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 ERHP84090 104 aaKnown RBP8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RAB32Q13637 225 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 AANATQ16613 207 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 POU2AF1Q16633 256 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SPINK9Q5DT21 86 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 CXorf66Q5JRM2 361 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 LCE2AQ5TA79 106 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 TCTE3Q8IZS6 198 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 TMEM167AQ8TBQ9 72 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 ZNF418Q8TF45 676 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SSMEM1Q8WWF3 244 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 ST6GAL2Q96JF0 529 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RITA1Q96K30 269 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 CIB3Q96Q77 187 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RBKSQ9H477 322 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PLEKHA3Q9HB20 300 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 COA4Q9NYJ1 87 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SIGLEC9Q9Y336 463 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 MOB4Q9Y3A3 225 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 POMT1Q9Y6A1 747 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 ACANP16112 2415 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 TRAV3A0A0B4J244 114 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 A0A1W2PN81 502 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 C15orf61A6NNL5 157 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 E5RGE8 158 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 K7EPK0 472 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 CHST1O43916 411 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 MPC2O95563 127 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 LY86O95711 162 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 IFNA10P01566 189 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 MBPP02686 304 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 IAPPP10997 89 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 CHRNA7P36544 502 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RPL27AP46776 148 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 EIF2B2P49770 351 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 CAV2P51636 162 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SUB1P53999 127 aaKnown RBP eCLIP8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 HSPE1P61604 102 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 POLR2GP62487 172 aaKnown RBP eCLIP8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 TNFRSF9Q07011 255 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 EBI3Q14213 229 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 HABP2Q14520 560 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PRSS8Q16651 343 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 C5orf64Q2M2E5 130 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 C11orf87Q6NUJ2 197 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 Q6YL49 198 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 Q6ZRM9 215 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 C9orf139Q6ZV77 190 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 ZNF546Q86UE3 836 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PUSL1Q8N0Z8 303 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 FAM71E2Q8N5Q1 922 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SIGLECL1Q8N7X8 197 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 NPBQ8NG41 125 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OR4D5Q8NGN0 318 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 GRPEL2Q8TAA5 225 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PPP1R14BQ96C90 147 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 WDR89Q96FK6 387 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RBM14Q96PK6 669 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RAB40CQ96S21 281 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 NEURL2Q9BR09 285 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 ZNF430Q9H8G1 570 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 TMEM160Q9NX00 188 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PSENENQ9NZ42 101 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 TCF19Q9Y242 345 aa8.53□□□□□ -1.04
TNFRSF1A-211ENST00000538363 TEX50A0A1B0GTY4 177 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 CYB5BO43169 146 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 HOXA3O43365 443 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 CA2P00918 260 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 IGLV2-23P01705 113 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 IGHV4-59P01825 116 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 C1QBP02746 253 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 CRYBA1P05813 215 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 C4BPBP20851 252 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 IER3P46695 156 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 AP2S1P53680 142 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 SRSF4Q08170 494 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 FXYD3Q14802 87 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 SPANXN5Q5MJ07 72 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 LCE2CQ5TA81 110 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 PRSS54Q6PEW0 395 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 C16orf82Q7Z2V1 217 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 OR5B3Q8NH48 314 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 DTD1Q8TEA8 209 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 AJUBAQ96IF1 538 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 HYLS1Q96M11 299 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 SLC25A31Q9H0C2 315 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 MBD2Q9UBB5 411 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 FOXA2Q9Y261 457 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 ZNF257Q9Y2Q1 563 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 ABCA1O95477 2261 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 MAP1AP78559 2803 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF1A-211ENST00000538363 F8P00451 2351 aa8.51□□□□□ -1.05
TNFRSF1A-211ENST00000538363 A6NDX4 124 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms