RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 FOXF2Q12947 444 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 ZNF343Q6P1L6 599 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 FOXH1O75593 365 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 CLPSP04118 112 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 IGHV3OR16-13A0A075B7E8 117 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 IGHV3-74A0A0B4J1X5 117 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 RNF224P0DH78 156 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 LAMTOR1Q6IAA8 161 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 RCC1LQ96I51 464 aaKnown RBP10.34□□□□□ -0.75
CIT-208ENST00000537607 MRPL37Q9BZE1 423 aaKnown RBP10.34□□□□□ -0.75
CIT-208ENST00000537607 OR51M1Q9H341 326 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 DPM3Q9P2X0 92 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 NPIPB11E5RHQ5 1161 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 LCN2P80188 198 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 OSR1Q8TAX0 266 aaPredicted RBP10.34□□□□□ -0.75
CIT-208ENST00000537607 GSX1Q9H4S2 264 aaPredicted RBP10.34□□□□□ -0.75
CIT-208ENST00000537607 SEMA5BQ9P283 1151 aa10.34□□□□□ -0.75
CIT-208ENST00000537607 CRYGSP22914 178 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 OR4A47Q6IF82 309 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 Q6ZN92 141 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 PARLQ9H300 379 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 FAM208BQ5VWN6 2430 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 TMEM189A5PLL7 270 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 RNF222A6NCQ9 220 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 PRB3Q04118 309 aaPredicted RBP10.33□□□□□ -0.76
CIT-208ENST00000537607 Q0VFX4 171 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 OR8A1Q8NGG7 326 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 DOCK9Q9BZ29 2069 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 IGKV1D-8A0A087WSZ0 117 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.33□□□□□ -0.76
CIT-208ENST00000537607 TM4SF20Q53R12 229 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 WDR82Q6UXN9 313 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 SPACA3Q8IXA5 215 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 FAM89BQ8N5H3 189 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 ZNF738Q8NE65 137 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 GATAD1Q8WUU5 269 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 S4R3C0 116 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 IGKV3D-15A0A087WSY6 115 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 TRBV6-7A0A0A0MS04 114 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 IL4P05112 153 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 MUC6Q6W4X9 2439 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 SPSB4Q96A44 273 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 PSMG3Q9BT73 122 aaPredicted RBP10.33□□□□□ -0.76
CIT-208ENST00000537607 MAP1LC3CQ9BXW4 147 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 TMEM56-RWDD3S4R434 201 aa10.33□□□□□ -0.76
CIT-208ENST00000537607 IGKV1-12A0A0C4DH73 117 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 TM4SF5O14894 197 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 IGKV1D-12P01611 117 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 RPL7P18124 248 aaKnown RBP10.32□□□□□ -0.76
CIT-208ENST00000537607 VN1R17PQ8TDU5 208 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 NABP1Q96AH0 204 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 LOC389332A0A1B0GUA5 103 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 A0A1W2PS18 150 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 CD81P60033 236 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 CCL19Q99731 98 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 PAM16Q9Y3D7 125 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 A0A087X0M5 115 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 TRAV24A0A0B4J272 114 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 A0A1B0GX30 115 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 SMIM6P0DI80 62 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 SLC25A33Q9BSK2 321 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 TRAV30A0A087WSZ9 112 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 TRAV14DV4A0A0A6YYC5 116 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 A0A0A6YYD4 124 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 SCGB1C2P0DMR2 95 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 CDKN1AP38936 164 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 RNFT1Q5M7Z0 435 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 BMPERQ8N8U9 685 aa10.32□□□□□ -0.76
CIT-208ENST00000537607 MRPL20Q9BYC9 149 aaKnown RBP10.32□□□□□ -0.76
CIT-208ENST00000537607 LYNX1G3V0Z9 82 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 CDK2AP1O14519 115 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 LYNX1P0DP58 116 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 TWIST1Q15672 202 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 TMEM177Q53S58 311 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 OR10J6PQ8NGY7 276 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 NPCDR1Q9BY65 106 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.31□□□□□ -0.76
CIT-208ENST00000537607 IGHV1-18A0A0C4DH31 117 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 J3QR89 54 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 AGAP20933 346 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 GCHFRP30047 84 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 EBLN2Q6P2I7 272 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 SSBP3Q9BWW4 388 aaPredicted RBP10.31□□□□□ -0.76
CIT-208ENST00000537607 TGIF2-C20orf24A0A0A6YYL0 155 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 TMEM97Q5BJF2 176 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 GTF2H5Q6ZYL4 71 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 OR4B1Q8NGF8 309 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 LINC00312Q9Y6C7 94 aa10.31□□□□□ -0.76
CIT-208ENST00000537607 IL6RP08887 468 aaPredicted RBP10.31□□□□□ -0.76
CIT-208ENST00000537607 MEF2CQ06413 473 aaPredicted RBP10.31□□□□□ -0.76
CIT-208ENST00000537607 SCN8AQ9UQD0 1980 aa10.3□□□□□ -0.76
CIT-208ENST00000537607 MT-ND6P03923 174 aa10.3□□□□□ -0.76
CIT-208ENST00000537607 TFF3Q07654 80 aa10.3□□□□□ -0.76
CIT-208ENST00000537607 IFI27L2Q9H2X8 130 aa10.3□□□□□ -0.76
CIT-208ENST00000537607 ZSWIM8A7E2V4 1837 aa10.3□□□□□ -0.76
CIT-208ENST00000537607 NOTCH2Q04721 2471 aa10.3□□□□□ -0.76
CIT-208ENST00000537607 WDR81Q562E7 1941 aa10.3□□□□□ -0.76
CIT-208ENST00000537607 C5orf63A6NC05 138 aa10.3□□□□□ -0.76
CIT-208ENST00000537607 CBY3A6NI87 242 aa10.3□□□□□ -0.76
CIT-208ENST00000537607 IGKV1D-33P01593 117 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms