RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 BAGE2Q86Y30 109 aa14.94□□□□□ -0.02
RAB40C-203ENST00000535977 SGMS2Q8NHU3 365 aa14.94□□□□□ -0.02
RAB40C-203ENST00000535977 FAM216AQ8WUB2 273 aa14.94□□□□□ -0.02
RAB40C-203ENST00000535977 SEPSECSQ9HD40 501 aaKnown RBP14.94□□□□□ -0.02
RAB40C-203ENST00000535977 C12orf77C9JDV5 145 aa14.94□□□□□ -0.02
RAB40C-203ENST00000535977 IAPPP10997 89 aa14.94□□□□□ -0.02
RAB40C-203ENST00000535977 NPPCP23582 126 aa14.94□□□□□ -0.02
RAB40C-203ENST00000535977 FOXL1Q12952 345 aa14.94□□□□□ -0.02
RAB40C-203ENST00000535977 SMIM21Q3B7S5 101 aa14.94□□□□□ -0.02
RAB40C-203ENST00000535977 MBNL2Q5VZF2 373 aaKnown RBP14.94□□□□□ -0.02
RAB40C-203ENST00000535977 IGLV1-44P01699 117 aa14.93□□□□□ -0.02
RAB40C-203ENST00000535977 CBLN1P23435 193 aa14.93□□□□□ -0.02
RAB40C-203ENST00000535977 LDLRAD2Q5SZI1 272 aa14.93□□□□□ -0.02
RAB40C-203ENST00000535977 OR1L1Q8NH94 360 aa14.93□□□□□ -0.02
RAB40C-203ENST00000535977 TIMM9Q9Y5J7 89 aa14.93□□□□□ -0.02
RAB40C-203ENST00000535977 DOCK11Q5JSL3 2073 aa14.93□□□□□ -0.02
RAB40C-203ENST00000535977 CIDEAO60543 219 aa14.93□□□□□ -0.02
RAB40C-203ENST00000535977 HBZP02008 142 aa14.93□□□□□ -0.02
RAB40C-203ENST00000535977 C1QTNF9P0C862 333 aa14.93□□□□□ -0.02
RAB40C-203ENST00000535977 EIF4EBP1Q13541 118 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-203ENST00000535977 C9orf106Q8NAJ2 232 aa14.93□□□□□ -0.02
RAB40C-203ENST00000535977 NEIL1Q96FI4 390 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-203ENST00000535977 WDR61Q9GZS3 305 aaKnown RBP14.93□□□□□ -0.02
RAB40C-203ENST00000535977 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-203ENST00000535977 RPL19P84098 196 aaKnown RBP14.92□□□□□ -0.02
RAB40C-203ENST00000535977 WDR82Q6UXN9 313 aa14.92□□□□□ -0.02
RAB40C-203ENST00000535977 SIGLECL1Q8N7X8 197 aa14.92□□□□□ -0.02
RAB40C-203ENST00000535977 OR2D2Q9H210 308 aa14.92□□□□□ -0.02
RAB40C-203ENST00000535977 RPH3ALQ9UNE2 315 aa14.92□□□□□ -0.02
RAB40C-203ENST00000535977 PIEZO1Q92508 2521 aa14.92□□□□□ -0.02
RAB40C-203ENST00000535977 PAGE4O60829 102 aa14.92□□□□□ -0.02
RAB40C-203ENST00000535977 EGR1P18146 543 aa14.92□□□□□ -0.02
RAB40C-203ENST00000535977 TMEM14EPQ6UXP3 125 aa14.92□□□□□ -0.02
RAB40C-203ENST00000535977 CORO2AQ92828 525 aa14.92□□□□□ -0.02
RAB40C-203ENST00000535977 OR4C12Q96R67 309 aa14.92□□□□□ -0.02
RAB40C-203ENST00000535977 BET1LQ9NYM9 111 aa14.92□□□□□ -0.02
RAB40C-203ENST00000535977 AGFG2O95081 481 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 CECR9P0C854 216 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 P0C879 139 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 AESQ08117 197 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 OCIAD2Q56VL3 154 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 SPANXN5Q5MJ07 72 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 VWA1Q6PCB0 445 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 IGF2-ASQ6U949 168 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 UBALD1Q8TB05 177 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 ZNF586Q9NXT0 402 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 FTH1P19P0C7X4 201 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 CD99P14209 185 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 TNFSF4P23510 183 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 NUDT11Q96G61 164 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 TAAR6Q96RI8 345 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 CST9LQ9H4G1 147 aa14.91□□□□□ -0.02
RAB40C-203ENST00000535977 RAB29O14966 203 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 MMP23AO75900 390 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 ADH4P08319 380 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 BMP5P22003 454 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 TSPOP30536 169 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 GABRA2P47869 451 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 CEBPDP49716 269 aaPredicted RBP14.9□□□□□ -0.02
RAB40C-203ENST00000535977 HTD2P86397 168 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 ZNF826PQ6ZT77 177 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 COQ2Q96H96 371 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 HSD17B10Q99714 261 aaKnown RBP14.9□□□□□ -0.02
RAB40C-203ENST00000535977 PROCRQ9UNN8 238 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 UBE2L5PA0A1B0GUS4 154 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 PGPEP1LA6NFU8 196 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 LRRC30A6NM36 301 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 WNT9BO14905 357 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 CLDN14O95500 239 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 SLC38A11Q08AI6 406 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 ACSM6Q6P461 480 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 ERASQ7Z444 233 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 FAM90A1Q86YD7 464 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 OR52L2PQ8NGH6 319 aa14.9□□□□□ -0.02
RAB40C-203ENST00000535977 TAF15Q92804 592 aaKnown RBP eCLIP14.9□□□□□ -0.02
RAB40C-203ENST00000535977 MRPL18Q9H0U6 180 aaKnown RBP14.9□□□□□ -0.02
RAB40C-203ENST00000535977 TRAV30A0A087WSZ9 112 aa14.89□□□□□ -0.03
RAB40C-203ENST00000535977 SPINT2O43291 252 aa14.89□□□□□ -0.03
RAB40C-203ENST00000535977 GPX1P07203 203 aa14.89□□□□□ -0.03
RAB40C-203ENST00000535977 VAMP3Q15836 100 aa14.89□□□□□ -0.03
RAB40C-203ENST00000535977 ZNF114Q8NC26 417 aa14.89□□□□□ -0.03
RAB40C-203ENST00000535977 ZNF71Q9NQZ8 489 aaPredicted RBP14.89□□□□□ -0.03
RAB40C-203ENST00000535977 ASPMQ8IZT6 3477 aa14.89□□□□□ -0.03
RAB40C-203ENST00000535977 IGHV3-64DA0A0J9YX35 117 aa14.89□□□□□ -0.03
RAB40C-203ENST00000535977 CLDN1O95832 211 aa14.89□□□□□ -0.03
RAB40C-203ENST00000535977 KRASP01116 189 aa14.89□□□□□ -0.03
RAB40C-203ENST00000535977 CXorf67Q86X51 503 aaPredicted RBP14.89□□□□□ -0.03
RAB40C-203ENST00000535977 TBL2Q9Y4P3 447 aaKnown RBP14.89□□□□□ -0.03
RAB40C-203ENST00000535977 PRSS47A8MTI9 375 aa14.88□□□□□ -0.03
RAB40C-203ENST00000535977 HSBP1L1C9JCN9 74 aa14.88□□□□□ -0.03
RAB40C-203ENST00000535977 FABP6P51161 128 aa14.88□□□□□ -0.03
RAB40C-203ENST00000535977 Q6ZR03 302 aa14.88□□□□□ -0.03
RAB40C-203ENST00000535977 DEFB124Q8NES8 71 aa14.88□□□□□ -0.03
RAB40C-203ENST00000535977 SPTBN4Q9H254 2564 aa14.88□□□□□ -0.03
RAB40C-203ENST00000535977 CTXND1A0A1B0GTU2 59 aa14.88□□□□□ -0.03
RAB40C-203ENST00000535977 RBFOX2O43251 390 aaKnown RBP eCLIP14.88□□□□□ -0.032e-11■■□□□ 12.3
RAB40C-203ENST00000535977 BHLHA15Q7RTS1 189 aaPredicted RBP14.88□□□□□ -0.03
RAB40C-203ENST00000535977 ASCL5Q7RTU5 278 aa14.88□□□□□ -0.03
RAB40C-203ENST00000535977 PPP1R35Q8TAP8 253 aa14.88□□□□□ -0.03
RAB40C-203ENST00000535977 DERL1Q9BUN8 251 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms