RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 CCL11P51671 97 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FGF8P55075 233 aaPredicted RBP4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HIST1H2BDP58876 126 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RAB11AP62491 216 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HIST1H2BCP62807 126 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TFF3Q07654 80 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 MZT1Q08AG7 82 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNF816Q0VGE8 651 aaPredicted RBP4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 KIAA0141Q14154 515 aaPredicted RBP4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HIST2H2BEQ16778 126 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 C17orf58Q2M2W7 97 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 MORN2Q502X0 79 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SPRNQ5BIV9 151 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 COA6Q5JTJ3 125 aaKnown RBP4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TMEM108Q6UXF1 575 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SLC16A13Q7RTY0 426 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNF439Q8NDP4 499 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 NANPQ8TBE9 248 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ABHD5Q8WTS1 349 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TCTEX1D2Q8WW35 142 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HIST1H2BHQ93079 126 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 LHX4Q969G2 390 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SDSLQ96GA7 329 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HIST1H2BNQ99877 126 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HIST1H2BMQ99879 126 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SSX3Q99909 188 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GGACTQ9BVM4 153 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 NPCDR1Q9BY65 106 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PRSS22Q9GZN4 317 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OPN3Q9H1Y3 402 aaPredicted RBP4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR51M1Q9H341 326 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GSN-AS1Q9NRJ2 163 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR6C3Q9NZP0 311 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 DOK5Q9P104 306 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CLN8Q9UBY8 286 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 NAT8Q9UHE5 227 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PROCRQ9UNN8 238 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FAM215AQ9Y5M1 114 aa4.83□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CADP27708 2225 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 MUC3AQ02505 3323 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TRGV8A0A0C4DH27 118 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 IGHV3-64DA0A0J9YX35 117 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SMCO3A2RU48 225 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZFP92A6NM28 416 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SPINT2O43291 252 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 YIF1AO95070 293 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HPRT1P00492 218 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 KRASP01116 189 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 IGHV2-70P01814 119 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OPN1MWP04001 364 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 S100A6P06703 90 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OPN1MW2P0DN77 364 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OPN1MW3P0DN78 364 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GZMHP20718 246 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FGF7P21781 194 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GCH1P30793 250 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CEACAM8P31997 349 aaPredicted RBP4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GLRXP35754 106 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 KIR2DS2P43631 304 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RPS10P46783 165 aaKnown RBP4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GABRA2P47869 451 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNF134P52741 427 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 LINC00205P59089 165 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR2B8PP59922 312 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SPCS3P61009 180 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RPL23P62829 140 aaKnown RBP4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 MEF2BQ02080 365 aaPredicted RBP4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 Q3ZCU0 254 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TIMM23BQ5SRD1 257 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 UTF1Q5T230 341 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SLC25A24Q6NUK1 477 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNF474Q6S9Z5 364 aaPredicted RBP4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 BTNL3Q6UXE8 466 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SPNS3Q6ZMD2 512 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 Q6ZS92 163 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TCF23Q7RTU1 214 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 H2BFWTQ7Z2G1 175 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 LRP11Q86VZ4 500 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TGIF2LYQ8IUE0 185 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HIST3H2BBQ8N257 126 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TPRX1Q8N7U7 411 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CNEP1R1Q8N9A8 125 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 DEFB124Q8NES8 71 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FRZBQ92765 325 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 R3HDM4Q96D70 268 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FAM210BQ96KR6 192 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ACTR3CQ9C0K3 210 aaPredicted RBP4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 MANBALQ9NQG1 85 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SLC39A9Q9NUM3 307 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 UFSP2Q9NUQ7 469 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PSG11Q9UQ72 335 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 LSM4Q9Y4Z0 139 aaKnown RBP4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RBM7Q9Y580 266 aaKnown RBP4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 URB1O60287 2271 aaKnown RBP4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CUL9Q8IWT3 2517 aa4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RAI1Q7Z5J4 1906 aaPredicted RBP4.82□□□□□ -1.64
TNFRSF1A-206ENST00000535038 COL6A3P12111 3177 aa4.81□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FREM2Q5SZK8 3169 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms