RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 C15orf61A6NNL5 157 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 ATP6V0E1O15342 81 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 CNIH1O95406 144 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 SLC35B1P78383 322 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 NDPQ00604 133 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 TNXAQ16473 311 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 RGS21Q2M5E4 152 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 C19orf54Q5BKX5 351 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 HSD17B13Q7Z5P4 300 aaPredicted RBP12.28□□□□□ -0.44
CTTN-215ENST00000533931 SLC35G3Q8N808 338 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 RNASE11Q8TAA1 199 aaKnown RBP12.28□□□□□ -0.44
CTTN-215ENST00000533931 SRSF12Q8WXF0 261 aaKnown RBP12.28□□□□□ -0.44
CTTN-215ENST00000533931 CLCC1Q96S66 551 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 COMMD5Q9GZQ3 224 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 PARP11Q9NR21 331 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 TMED3Q9Y3Q3 217 aa12.28□□□□□ -0.44
CTTN-215ENST00000533931 INMT-MINDY4F8WBC2 141 aa12.27□□□□□ -0.45
CTTN-215ENST00000533931 BRI3O95415 125 aa12.27□□□□□ -0.45
CTTN-215ENST00000533931 DHFRP00374 187 aa12.27□□□□□ -0.45
CTTN-215ENST00000533931 SLC25A6P12236 298 aa12.27□□□□□ -0.45
CTTN-215ENST00000533931 RPL27AP46776 148 aaKnown RBP12.27□□□□□ -0.45
CTTN-215ENST00000533931 CFHR3Q02985 330 aa12.27□□□□□ -0.45
CTTN-215ENST00000533931 ANKRD55Q3KP44 614 aa12.27□□□□□ -0.45
CTTN-215ENST00000533931 NMSQ5H8A3 153 aa12.27□□□□□ -0.45
CTTN-215ENST00000533931 OR4A16Q8NH70 328 aa12.27□□□□□ -0.45
CTTN-215ENST00000533931 ZNF431Q8TF32 576 aaPredicted RBP12.27□□□□□ -0.45
CTTN-215ENST00000533931 PHB2Q99623 299 aa12.27□□□□□ -0.45
CTTN-215ENST00000533931 GPN1Q9HCN4 374 aaPredicted RBP12.27□□□□□ -0.45
CTTN-215ENST00000533931 TRAV41A0A0B4J266 112 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 LINC01548A6NM66 108 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 SNRPGP15A8MWD9 76 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 OR9G9P0C7N8 305 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 EGR2P11161 476 aaPredicted RBP12.26□□□□□ -0.45
CTTN-215ENST00000533931 OR2B8PP59922 312 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 GNB1P62873 340 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 TMEM95Q3KNT9 176 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 MRPL41Q8IXM3 137 aaKnown RBP12.26□□□□□ -0.45
CTTN-215ENST00000533931 KLHDC1Q8N7A1 406 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 MINDY2Q8NBR6 621 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 OR1L8Q8NGR8 309 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 CASTOR1Q8WTX7 329 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 WFDC12Q8WWY7 111 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 COL6A5A8TX70 2615 aa12.26□□□□□ -0.45
CTTN-215ENST00000533931 TRAV3A0A0B4J244 114 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 A0A0B4J293 547 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 A0A1B0GU03 582 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 PSMB11A5LHX3 300 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 H3BUA1 57 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 IGHG4P01861 327 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 PPIFP30405 207 aaKnown RBP12.25□□□□□ -0.45
CTTN-215ENST00000533931 PDLIM3Q53GG5 364 aaPredicted RBP12.25□□□□□ -0.45
CTTN-215ENST00000533931 LYZL2Q7Z4W2 148 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 CENPVQ7Z7K6 275 aaPredicted RBP12.25□□□□□ -0.45
CTTN-215ENST00000533931 RNF152Q8N8N0 203 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 OR5M8Q8NGP6 311 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 OR52E5Q8NH55 327 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 GRPEL2Q8TAA5 225 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 ABHD5Q8WTS1 349 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 TAF15Q92804 592 aaKnown RBP eCLIP12.25□□□□□ -0.45
CTTN-215ENST00000533931 QTRT1Q9BXR0 403 aaKnown RBP12.25□□□□□ -0.45
CTTN-215ENST00000533931 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.25□□□□□ -0.45
CTTN-215ENST00000533931 FBXO7Q9Y3I1 522 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 OR51B2Q9Y5P1 312 aa12.25□□□□□ -0.45
CTTN-215ENST00000533931 A0A0G2JRQ6 117 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 MSGN1A6NI15 193 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 DBX1A6NMT0 343 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 TEX22C9J3V5 150 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 INS-IGF2F8WCM5 200 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 ELANEP08246 267 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 SULT1A3P0DMM9 295 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 SULT1A4P0DMN0 295 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 HSPE1P61604 102 aaKnown RBP12.24□□□□□ -0.45
CTTN-215ENST00000533931 TEX38Q6PEX7 206 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 GPR146Q96CH1 333 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 NOL4LQ96MY1 436 aaPredicted RBP12.24□□□□□ -0.45
CTTN-215ENST00000533931 ZNF747Q9BV97 191 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 NDUFA4L2Q9NRX3 87 aa12.24□□□□□ -0.45
CTTN-215ENST00000533931 TEX50A0A1B0GTY4 177 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 C7orf66A4D0T2 115 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 NPIPB5A8MRT5 1133 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 IFNA21P01568 189 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 IGLV1-40P01703 118 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 TRAPPC2P0DI81 140 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 TRAPPC2BP0DI82 140 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 PRCDQ00LT1 54 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 FOXE3Q13461 319 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 SMCO1Q147U7 214 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 OXA1LQ15070 435 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 C10orf55Q5SWW7 151 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 UNQ5815/PRO19632Q6UWF5 114 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 C12orf54Q6X4T0 127 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 LFNGQ8NES3 379 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 OR4X2Q8NGF9 303 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 FAM110DQ8TAY7 271 aaPredicted RBP12.23□□□□□ -0.45
CTTN-215ENST00000533931 PDCD10Q9BUL8 212 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 PRR13Q9NZ81 148 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 CACNG5Q9UF02 275 aa12.23□□□□□ -0.45
CTTN-215ENST00000533931 A0A1W2PN81 502 aa12.22□□□□□ -0.45
CTTN-215ENST00000533931 CGB1A6NKQ9 187 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms