RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TGIF2LXQ8IUE1 241 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 CD300LFQ8TDQ1 290 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 DDB2Q92466 427 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 RBPMSQ93062 196 aaKnown RBP8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 IL22RA2Q969J5 263 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 SEC22AQ96IW7 307 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 OR2A7Q96R45 310 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 NABP2Q9BQ15 211 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 MRPL20Q9BYC9 149 aaKnown RBP8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 ZMAT4Q9H898 229 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 RANGRFQ9HD47 186 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 FAM212BQ9NTI7 297 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 DPM3Q9P2X0 92 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 SMAD5-AS1Q9Y6J3 95 aa8.89□□□□□ -0.99
TRAPPC4-213ENST00000533149 RBMY1BA6NDE4 496 aaKnown RBP8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 RBMY1EA6NEQ0 496 aaKnown RBP8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 LEUTXA8MZ59 168 aa8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 RBMY1DP0C7P1 496 aaKnown RBP8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 RPA2P15927 270 aa8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 H2BFSP57053 126 aa8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 LDLRAD2Q5SZI1 272 aa8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 GSG1LQ6UXU4 331 aa8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 SBSPONQ8IVN8 264 aa8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 SLC35G3Q8N808 338 aa8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 OR5M8Q8NGP6 311 aa8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 FYTTD1Q96QD9 318 aaKnown RBP8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 P2RX4Q99571 388 aa8.88□□□□□ -0.99
TRAPPC4-213ENST00000533149 DUXBA0A1W2PPF3 345 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 MPTX1A8MV57 137 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 RBFOX2O43251 390 aaKnown RBP eCLIP8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 S1PR2O95136 353 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 GIPP09681 153 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 RAP2BP61225 183 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 RPL23AP62750 156 aaKnown RBP8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 TAGLNQ01995 201 aaKnown RBP8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 TPTE2P1Q5T6R2 138 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 C9orf66Q5T8R8 295 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 C10orf99Q6UWK7 81 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 MOB3BQ86TA1 216 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 OR5AN1Q8NGI8 311 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 RPEQ96AT9 228 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 GPR146Q96CH1 333 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 RBMXL1Q96E39 390 aaKnown RBP8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 OR10C1Q96KK4 312 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 C2orf50Q96LR7 162 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 PDCD10Q9BUL8 212 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 SLC35D1Q9NTN3 355 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 TMED3Q9Y3Q3 217 aa8.87□□□□□ -0.99
TRAPPC4-213ENST00000533149 PIGBOS1A0A0B4J2F0 54 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 IGHV1-3A0A0C4DH29 117 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 NUDT19A8MXV4 375 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 H0YJW9 148 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 SMLR1H3BR10 107 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 HPRT1P00492 218 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 KRASP01116 189 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 IGKV1-5P01602 117 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 RRASP10301 218 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 VDAC1P21796 283 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 CEACAM3P40198 252 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 IAH1Q2TAA2 248 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 MINOS1Q5TGZ0 78 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 C8orf86Q6ZUL3 223 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 TCTE3Q8IZS6 198 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 ZBTB8BQ8NAP8 495 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 OR4S2Q8NH73 311 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 LSM10Q969L4 123 aaKnown RBP8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 PLEKHA2Q9HB19 425 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 ZFP57Q9NU63 452 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 GSKIPQ9P0R6 139 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 ZNF256Q9Y2P7 627 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 HILPDAQ9Y5L2 63 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 MINOS1-NBL1R4GNA1 71 aa8.86□□□□□ -0.99
TRAPPC4-213ENST00000533149 IGHV3-72A0A0B4J1Y9 119 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 A0A0G2JRQ6 117 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 PSMB11A5LHX3 300 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 H7C2Y5 167 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 ATG12O94817 140 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 CRYZL1O95825 349 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 APOA2P02652 100 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 MC5RP33032 325 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 G6PCP35575 357 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 IL15RAQ13261 267 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 RTL8BQ17RB0 113 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 IZUMO4Q1ZYL8 232 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 Q5BKY6 102 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 NMSQ5H8A3 153 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 RNASE11Q8TAA1 199 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 ASB13Q8WXK3 278 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 PPP1R14BQ96C90 147 aa8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 RRNAD1Q96FB5 475 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-213ENST00000533149 A0A1W2PPI3 338 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 OOSP1A8MZH6 123 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 TXNL1O43396 289 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 HRASP01112 189 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 NQO2P16083 231 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 AKR1C2P52895 323 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 RPS16P62249 146 aaKnown RBP8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 CYCSP99999 105 aaKnown RBP8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 TMEM177Q53S58 311 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 Q6ZRM9 215 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms