RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 HSPB1P04792 205 aaKnown RBP11.86□□□□□ -0.51
CPSF1-210ENST00000532935 RLN1P04808 185 aa11.86□□□□□ -0.51
CPSF1-210ENST00000532935 NQO2P16083 231 aa11.86□□□□□ -0.51
CPSF1-210ENST00000532935 RPL27AP46776 148 aaKnown RBP11.86□□□□□ -0.51
CPSF1-210ENST00000532935 SLURP1P55000 103 aa11.86□□□□□ -0.51
CPSF1-210ENST00000532935 DEFA5Q01523 94 aa11.86□□□□□ -0.51
CPSF1-210ENST00000532935 POU2AF1Q16633 256 aa11.86□□□□□ -0.51
CPSF1-210ENST00000532935 OR4A47Q6IF82 309 aa11.86□□□□□ -0.51
CPSF1-210ENST00000532935 OR4A5Q8NH83 315 aa11.86□□□□□ -0.51
CPSF1-210ENST00000532935 FCAMRQ8WWV6 532 aa11.86□□□□□ -0.51
CPSF1-210ENST00000532935 C7orf50Q9BRJ6 194 aaKnown RBP11.86□□□□□ -0.51
CPSF1-210ENST00000532935 THAP7Q9BT49 309 aaPredicted RBP11.86□□□□□ -0.51
CPSF1-210ENST00000532935 PLEKHA2Q9HB19 425 aa11.86□□□□□ -0.51
CPSF1-210ENST00000532935 MTFP1Q9UDX5 166 aa11.86□□□□□ -0.51
CPSF1-210ENST00000532935 TEX22C9J3V5 150 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 E7EUB6 86 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 GABARAPH6UMI1 98 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 K7EIL1 84 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 OVOL1O14753 267 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 F2RP25116 425 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 INPP1P49441 399 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 RPL8P62917 257 aaKnown RBP11.85□□□□□ -0.51
CPSF1-210ENST00000532935 SSBP1Q04837 148 aaKnown RBP11.85□□□□□ -0.51
CPSF1-210ENST00000532935 PHLDA2Q53GA4 152 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 MZT2BQ6NZ67 158 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 LPCAT3Q6P1A2 487 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 TTC9CQ8N5M4 171 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 SMIM4Q8WVI0 70 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 DLX4Q92988 240 aaPredicted RBP11.85□□□□□ -0.51
CPSF1-210ENST00000532935 USMG5Q96IX5 58 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 RSRP1Q9BUV0 290 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 HRASLSQ9HDD0 168 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 COMMD9Q9P000 198 aa11.85□□□□□ -0.51
CPSF1-210ENST00000532935 ZMAT5Q9UDW3 170 aaKnown RBP11.85□□□□□ -0.51
CPSF1-210ENST00000532935 A0A1B0GW64 132 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 WI2-2373I1.2A0A1W2PRP0 233 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 HMX3A6NHT5 357 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 RBMXL2O75526 392 aaKnown RBP11.84□□□□□ -0.51
CPSF1-210ENST00000532935 PRH1P02810 166 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 CD3DP04234 171 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 IL6RP08887 468 aaPredicted RBP11.84□□□□□ -0.51
CPSF1-210ENST00000532935 ZNF735P0CB33 412 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 HLA-GP17693 338 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 TBPP20226 339 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 UCP3P55916 312 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 AP3S2P59780 193 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 DGCR2P98153 550 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 RNASE10Q5GAN6 216 aaKnown RBP11.84□□□□□ -0.51
CPSF1-210ENST00000532935 SLC25A42Q86VD7 318 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 DMBX1Q8NFW5 382 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 TRIM63Q969Q1 353 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 FYTTD1Q96QD9 318 aaKnown RBP11.84□□□□□ -0.51
CPSF1-210ENST00000532935 TMEM140Q9NV12 185 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 TBC1D24Q9ULP9 559 aa11.84□□□□□ -0.51
CPSF1-210ENST00000532935 SORL1Q92673 2214 aa11.83□□□□□ -0.52
CPSF1-210ENST00000532935 ANKRD34BA5PLL1 514 aa11.83□□□□□ -0.52
CPSF1-210ENST00000532935 UPK2O00526 184 aa11.83□□□□□ -0.52
CPSF1-210ENST00000532935 IFNA6P05013 189 aa11.83□□□□□ -0.52
CPSF1-210ENST00000532935 MYOD1P15172 320 aa11.83□□□□□ -0.52
CPSF1-210ENST00000532935 S100GP29377 79 aa11.83□□□□□ -0.52
CPSF1-210ENST00000532935 RHOGP84095 191 aa11.83□□□□□ -0.52
CPSF1-210ENST00000532935 SLC38A6Q8IZM9 456 aa11.83□□□□□ -0.52
CPSF1-210ENST00000532935 RANGRFQ9HD47 186 aaPredicted RBP11.83□□□□□ -0.52
CPSF1-210ENST00000532935 SLC2A9Q9NRM0 540 aa11.83□□□□□ -0.52
CPSF1-210ENST00000532935 DNAH9Q9NYC9 4486 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 TRBV9A0A0B4J1U6 114 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 TRAV3A0A0B4J244 114 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 FAM223BA6NKX1 122 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 NPIPB5A8MRT5 1133 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 CENPXA8MT69 81 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 RPA2P15927 270 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 LPAR6P43657 344 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 INSL3P51460 131 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 ERVK-16P61578 105 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 ZNF585BQ52M93 769 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 ZNF343Q6P1L6 599 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 TBC1D26Q86UD7 250 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 LHFPL1Q86WI0 220 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 FAM223AQ8IWN6 122 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 ARRDC1Q8N5I2 433 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 TMEM229BQ8NBD8 167 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 ZNF257Q9Y2Q1 563 aa11.82□□□□□ -0.52
CPSF1-210ENST00000532935 NAP1L6A6NFF2 107 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 CGB1A6NKQ9 187 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 MARCH11A6NNE9 402 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 PLA2G10O15496 165 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 CD74P04233 296 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 FGF2P09038 288 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 PGAM2P15259 253 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 AREGP15514 252 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 ZP3P21754 424 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 TAS2R19P59542 299 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 OR2B8PP59922 312 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 C19orf35Q6ZS72 473 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 ZNF429Q86V71 674 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 TOMM5Q8N4H5 51 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 NECAP1Q8NC96 275 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 DUSP18Q8NEJ0 188 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 OR4D10Q8NGI6 311 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 FAM212BQ9NTI7 297 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms