RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 SSBP2P81877 361 aaPredicted RBP11.34□□□□□ -0.59
COL16A1-217ENST00000532877 SMCO1Q147U7 214 aa11.34□□□□□ -0.59
COL16A1-217ENST00000532877 IAH1Q2TAA2 248 aaPredicted RBP11.34□□□□□ -0.59
COL16A1-217ENST00000532877 THOC7Q6I9Y2 204 aaKnown RBP11.34□□□□□ -0.59
COL16A1-217ENST00000532877 MMD2Q8IY49 270 aa11.34□□□□□ -0.59
COL16A1-217ENST00000532877 OR11H7Q8NGC8 314 aa11.34□□□□□ -0.59
COL16A1-217ENST00000532877 OR4A16Q8NH70 328 aa11.34□□□□□ -0.59
COL16A1-217ENST00000532877 OR10C1Q96KK4 312 aa11.34□□□□□ -0.59
COL16A1-217ENST00000532877 JMJD8Q96S16 334 aa11.34□□□□□ -0.59
COL16A1-217ENST00000532877 TMEM14BQ9NUH8 114 aa11.34□□□□□ -0.59
COL16A1-217ENST00000532877 COA4Q9NYJ1 87 aa11.34□□□□□ -0.59
COL16A1-217ENST00000532877 PRNDQ9UKY0 176 aa11.34□□□□□ -0.59
COL16A1-217ENST00000532877 FOXA2Q9Y261 457 aaPredicted RBP11.34□□□□□ -0.59
COL16A1-217ENST00000532877 TET2Q6N021 2002 aaPredicted RBP11.34□□□□□ -0.59
COL16A1-217ENST00000532877 MEGF8Q7Z7M0 2845 aa11.34□□□□□ -0.59
COL16A1-217ENST00000532877 C5orf51A6NDU8 294 aa11.33□□□□□ -0.6
COL16A1-217ENST00000532877 TCF21O43680 179 aa11.33□□□□□ -0.6
COL16A1-217ENST00000532877 PITX3O75364 302 aa11.33□□□□□ -0.6
COL16A1-217ENST00000532877 RBMXL2O75526 392 aaKnown RBP11.33□□□□□ -0.6
COL16A1-217ENST00000532877 MYOD1P15172 320 aa11.33□□□□□ -0.6
COL16A1-217ENST00000532877 H2BFSP57053 126 aa11.33□□□□□ -0.6
COL16A1-217ENST00000532877 GNB1P62873 340 aa11.33□□□□□ -0.6
COL16A1-217ENST00000532877 UBA52P62987 128 aaKnown RBP11.33□□□□□ -0.6
COL16A1-217ENST00000532877 TNXAQ16473 311 aa11.33□□□□□ -0.6
COL16A1-217ENST00000532877 AARDQ4LEZ3 155 aa11.33□□□□□ -0.6
COL16A1-217ENST00000532877 GSG1LQ6UXU4 331 aa11.33□□□□□ -0.6
COL16A1-217ENST00000532877 HSPB9Q9BQS6 159 aa11.33□□□□□ -0.6
COL16A1-217ENST00000532877 QTRT1Q9BXR0 403 aaKnown RBP11.33□□□□□ -0.6
COL16A1-217ENST00000532877 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.33□□□□□ -0.6
COL16A1-217ENST00000532877 IGHV7-81A0A0B4J1V7 117 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 ST8SIA3O43173 380 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 MAS1LP35410 378 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 COMPP49747 757 aaPredicted RBP11.32□□□□□ -0.6
COL16A1-217ENST00000532877 BLCAPP62952 87 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 NDPQ00604 133 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 C10orf55Q5SWW7 151 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 ZNF429Q86V71 674 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 ZBTB8BQ8NAP8 495 aaPredicted RBP11.32□□□□□ -0.6
COL16A1-217ENST00000532877 OR4D5Q8NGN0 318 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 OR1S1Q8NH92 325 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 C2orf50Q96LR7 162 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 NPFFR1Q9GZQ6 430 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 OR51B2Q9Y5P1 312 aa11.32□□□□□ -0.6
COL16A1-217ENST00000532877 TENM1Q9UKZ4 2725 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 FAM181BA6NEQ2 426 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 HMX3A6NHT5 357 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 ACTL6BO94805 426 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 NXPH3O95157 252 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 OPN1MWP04001 364 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 OPN1MW2P0DN77 364 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 OPN1MW3P0DN78 364 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 CX3CL1P78423 397 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 ZNF562Q6V9R5 426 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 OR5B3Q8NH48 314 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 PDCD10Q9BUL8 212 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 COMMD5Q9GZQ3 224 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 FKBP11Q9NYL4 201 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 GSKIPQ9P0R6 139 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 ZNF257Q9Y2Q1 563 aa11.31□□□□□ -0.6
COL16A1-217ENST00000532877 TEX50A0A1B0GTY4 177 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 A0A1B0GW64 132 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 E7EUB6 86 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 TRIM77I1YAP6 450 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 CNIH1O95406 144 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 TRAPPC2P0DI81 140 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 TRAPPC2BP0DI82 140 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 RPL27AP46776 148 aaKnown RBP11.3□□□□□ -0.6
COL16A1-217ENST00000532877 BCAP31P51572 246 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 FXYD3Q14802 87 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 C9orf152Q5JTZ5 239 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 Q6ZS46 218 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 OR1L8Q8NGR8 309 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 GRPEL2Q8TAA5 225 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 SRSF12Q8WXF0 261 aaKnown RBP11.3□□□□□ -0.6
COL16A1-217ENST00000532877 ARPC1AQ92747 370 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 WDR89Q96FK6 387 aaPredicted RBP11.3□□□□□ -0.6
COL16A1-217ENST00000532877 C19orf24Q9BVV8 132 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 NMES1Q9C002 83 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 ZNF436Q9C0F3 470 aaPredicted RBP11.3□□□□□ -0.6
COL16A1-217ENST00000532877 ZNF702PQ9H963 129 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 HSPB7Q9UBY9 170 aa11.3□□□□□ -0.6
COL16A1-217ENST00000532877 CGB1A6NKQ9 187 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 FAM90A26D6RGX4 464 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 SCGB1D2O95969 90 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 IFNA17P01571 189 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 IGHG2P01859 326 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 SPCS3P61009 180 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 RPL15P61313 204 aaKnown RBP11.29□□□□□ -0.6
COL16A1-217ENST00000532877 HSPE1P61604 102 aaKnown RBP11.29□□□□□ -0.6
COL16A1-217ENST00000532877 TNFRSF9Q07011 255 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 SRSF4Q08170 494 aaKnown RBP11.29□□□□□ -0.6
COL16A1-217ENST00000532877 IL15RAQ13261 267 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 PDLIM3Q53GG5 364 aaPredicted RBP11.29□□□□□ -0.6
COL16A1-217ENST00000532877 SPINK9Q5DT21 86 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 CXorf66Q5JRM2 361 aaPredicted RBP11.29□□□□□ -0.6
COL16A1-217ENST00000532877 OR52E5Q8NH55 327 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 CHAC2Q8WUX2 184 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 FAM103A1Q9BTL3 118 aaKnown RBP11.29□□□□□ -0.6
COL16A1-217ENST00000532877 PARP11Q9NR21 331 aa11.29□□□□□ -0.6
COL16A1-217ENST00000532877 NDUFA4L2Q9NRX3 87 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms