RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 M0R143 59 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 MAS1LP35410 378 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 MEF2BQ02080 365 aaPredicted RBP9.51□□□□□ -0.89
PTPRK-221ENST00000532331 SLC16A13Q7RTY0 426 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 OR4C5Q8NGB2 326 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 RAB24Q969Q5 203 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 MRPL13Q9BYD1 178 aaKnown RBP9.51□□□□□ -0.89
PTPRK-221ENST00000532331 PRO1933Q9H354 126 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 RPL29P47914 159 aaKnown RBP9.51□□□□□ -0.89
PTPRK-221ENST00000532331 ATP5IP56385 69 aaPredicted RBP9.51□□□□□ -0.89
PTPRK-221ENST00000532331 DHRS11Q6UWP2 260 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 FBXL15Q9H469 300 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 HSPB1P04792 205 aaKnown RBP9.51□□□□□ -0.89
PTPRK-221ENST00000532331 C8orf88P0DMB2 117 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 SRD5A1P18405 259 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 RAB9AP51151 201 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 PACRGQ96M98 296 aaPredicted RBP9.51□□□□□ -0.89
PTPRK-221ENST00000532331 BET1LQ9NYM9 111 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 SLC25A15Q9Y619 301 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 IBA57Q5T440 356 aaKnown RBP9.5□□□□□ -0.89
PTPRK-221ENST00000532331 LAIR2Q6ISS4 152 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 OR8A1Q8NGG7 326 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 TCRBV4S1A1TA0A5B7 111 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 RNF224P0DH78 156 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 C19orf24Q9BVV8 132 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 PEMTQ9UBM1 199 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 DLX1P56177 255 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 FAM3BP58499 235 aaPredicted RBP9.5□□□□□ -0.89
PTPRK-221ENST00000532331 RPL39P5Q59GN2 51 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 DTX1Q86Y01 620 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 OR51G1Q8NGK1 321 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 IFT22Q9H7X7 185 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 FAM181BA6NEQ2 426 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 PTBP3O95758 552 aaKnown RBP9.5□□□□□ -0.89
PTPRK-221ENST00000532331 NUTF2P61970 127 aaKnown RBP9.5□□□□□ -0.89
PTPRK-221ENST00000532331 NSUN5P1Q3KNT7 163 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 VKORC1L1Q8N0U8 176 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 TRAF4Q9BUZ4 470 aaPredicted RBP9.5□□□□□ -0.89
PTPRK-221ENST00000532331 TM2D1Q9BX74 207 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 CGB1A6NKQ9 187 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 ZNF343Q6P1L6 599 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 WBP1Q96G27 269 aa9.5□□□□□ -0.89
PTPRK-221ENST00000532331 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.49□□□□□ -0.89
PTPRK-221ENST00000532331 C12orf77C9JDV5 145 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 CCL3L1P16619 93 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 Q5PR19 223 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.49□□□□□ -0.89
PTPRK-221ENST00000532331 OR13A1Q8NGR1 328 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 ARPC1AQ92747 370 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 C1QL1O75973 258 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 PSMB2P49721 201 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 ZNF660Q6AZW8 331 aaPredicted RBP9.49□□□□□ -0.89
PTPRK-221ENST00000532331 OSR1Q8TAX0 266 aaPredicted RBP9.49□□□□□ -0.89
PTPRK-221ENST00000532331 OR51M1Q9H341 326 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 PI4KAP42356 2102 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 ARHGEF17Q96PE2 2063 aaPredicted RBP9.49□□□□□ -0.89
PTPRK-221ENST00000532331 INTS1Q8N201 2190 aaKnown RBP9.49□□□□□ -0.89
PTPRK-221ENST00000532331 MBNL2Q5VZF2 373 aaKnown RBP9.49□□□□□ -0.89
PTPRK-221ENST00000532331 ZNF841Q6ZN19 808 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 COL6A6A6NMZ7 2263 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 MT-ND6P03923 174 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 TSPOP30536 169 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 CDC42EP3Q9UKI2 254 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 ANK1P16157 1881 aa9.49□□□□□ -0.89
PTPRK-221ENST00000532331 MEOX2P50222 304 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 WDR82Q6UXN9 313 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 C1QL2Q7Z5L3 287 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 LINC01356Q8N9X3 169 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 NPIPB7O75200 414 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 MRPL32Q9BYC8 188 aaKnown RBP9.48□□□□□ -0.89
PTPRK-221ENST00000532331 TMEM133Q9H2Q1 129 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 LOC389332A0A1B0GUA5 103 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 A6NNC1 897 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 RPS20P60866 119 aaKnown RBP9.48□□□□□ -0.89
PTPRK-221ENST00000532331 C3orf56Q8N813 242 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 FBXL7Q9UJT9 491 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 FRMPD3Q5JV73 1810 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 SRSF9Q13242 221 aaKnown RBP eCLIP9.48□□□□□ -0.89
PTPRK-221ENST00000532331 TRAV20A0A0B4J274 112 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 CRXO43186 299 aaPredicted RBP9.48□□□□□ -0.89
PTPRK-221ENST00000532331 EFNA2O43921 213 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 NMBP08949 121 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 ARL14EPLP0DKL9 152 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 CRYGSP22914 178 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 RELBQ01201 579 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 NPIPB3Q92617 1050 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 TP53RKQ96S44 253 aa9.48□□□□□ -0.89
PTPRK-221ENST00000532331 IGHV3-35A0A0C4DH35 117 aa9.47□□□□□ -0.89
PTPRK-221ENST00000532331 PQLC2LA1A4F0 135 aa9.47□□□□□ -0.89
PTPRK-221ENST00000532331 NPIPB6E9PJ23 425 aa9.47□□□□□ -0.89
PTPRK-221ENST00000532331 ACAA1P09110 424 aaPredicted RBP9.47□□□□□ -0.89
PTPRK-221ENST00000532331 FOXG1P55316 489 aaPredicted RBP9.47□□□□□ -0.89
PTPRK-221ENST00000532331 SIP14410 1827 aa9.47□□□□□ -0.89
PTPRK-221ENST00000532331 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
PTPRK-221ENST00000532331 H2BFSP57053 126 aa9.47□□□□□ -0.89
PTPRK-221ENST00000532331 PRB3Q04118 309 aaPredicted RBP9.47□□□□□ -0.89
PTPRK-221ENST00000532331 C11orf44Q8N8P7 122 aa9.47□□□□□ -0.89
PTPRK-221ENST00000532331 SPSB4Q96A44 273 aa9.47□□□□□ -0.89
PTPRK-221ENST00000532331 SDK2Q58EX2 2172 aa9.47□□□□□ -0.89
PTPRK-221ENST00000532331 NDUFS8O00217 210 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms