RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 TMEM235A6NFC5 223 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 LINC00473A8K010 186 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 E7EUB6 86 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 NDUFB8O95169 186 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 IGLV2-14P01704 120 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 MYOD1P15172 320 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 NFYAP23511 347 aaPredicted RBP6.62□□□□□ -1.35
USF1-210ENST00000531842 BMI1P35226 326 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 ARL6IP1Q15041 203 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 CDK10Q15131 360 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 Q6ZS49 121 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 WFDC3Q8IUB2 231 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 H1FOOQ8IZA3 346 aaPredicted RBP6.62□□□□□ -1.35
USF1-210ENST00000531842 TTC9CQ8N5M4 171 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 NUDCD2Q8WVJ2 157 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 FYTTD1Q96QD9 318 aaKnown RBP6.62□□□□□ -1.35
USF1-210ENST00000531842 NAA50Q9GZZ1 169 aaKnown RBP6.62□□□□□ -1.35
USF1-210ENST00000531842 MRPS7Q9Y2R9 242 aaKnown RBP6.62□□□□□ -1.35
USF1-210ENST00000531842 AGRNO00468 2067 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 A0A087WXM4 84 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 A0A1B0GW64 132 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 GGCTO75223 188 aaKnown RBP6.61□□□□□ -1.35
USF1-210ENST00000531842 REG1AP05451 166 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 CTXN2P0C2S0 81 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 SAA1P0DJI8 122 aaPredicted RBP6.61□□□□□ -1.35
USF1-210ENST00000531842 ARL3P36405 182 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 BRWD1-AS2P59051 145 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 LSM3P62310 102 aaKnown RBP6.61□□□□□ -1.35
USF1-210ENST00000531842 FAM209BQ5JX69 171 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 HACD4Q5VWC8 232 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 KCTD9Q7L273 389 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 VKORC1L1Q8N0U8 176 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 ZNF645Q8N7E2 425 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 OR13F1Q8NGS4 319 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 OR5B3Q8NH48 314 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 VSTM2AQ8TAG5 236 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 TCTEX1D2Q8WW35 142 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 RNF183Q96D59 192 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 RHBDL2Q9NX52 303 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 TECRQ9NZ01 308 aaKnown RBP6.61□□□□□ -1.35
USF1-210ENST00000531842 FBXL7Q9UJT9 491 aa6.61□□□□□ -1.35
USF1-210ENST00000531842 IGHV3OR16-8A0A075B7F1 116 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 IGKV1D-13A0A0B4J2D9 117 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 MFSD2BA6NFX1 497 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 SLC22A5O76082 557 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 TNFAIP8O95379 198 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 DHFRP00374 187 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 IGKV1-13P0DP09 117 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 DEFA4P12838 97 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 RPA2P15927 270 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 DTYMKP23919 212 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 RPL27AP46776 148 aaKnown RBP6.6□□□□□ -1.35
USF1-210ENST00000531842 GNG2P59768 71 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 NCS1P62166 190 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 EIF4EBP1Q13541 118 aaPredicted RBP6.6□□□□□ -1.35
USF1-210ENST00000531842 ODF3L2Q3SX64 289 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 FAM106AQ4KMX7 169 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 ZNF585BQ52M93 769 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 IDNKQ5T6J7 187 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 Q6ZWC4 215 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 APRG1Q8IVJ8 170 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 GVQW1Q8N7I0 195 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 OR4S2Q8NH73 311 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 OR2A7Q96R45 310 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 FUNDC2Q9BWH2 189 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 APLNQ9ULZ1 77 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 SPATA2Q9UM82 520 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 ZNF257Q9Y2Q1 563 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 RBMX2Q9Y388 322 aaKnown RBP6.6□□□□□ -1.35
USF1-210ENST00000531842 OR2W1Q9Y3N9 320 aa6.6□□□□□ -1.35
USF1-210ENST00000531842 TRAV18A0A075B6X5 111 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 TEX22C9J3V5 150 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 M0R2N4 97 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 LGALS9O00182 355 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 KBTBD11O94819 623 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 HLA-DQB1P01920 261 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 IL6RP08887 468 aaPredicted RBP6.59□□□□□ -1.35
USF1-210ENST00000531842 AREGP15514 252 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 RPL30P62888 115 aaKnown RBP6.59□□□□□ -1.35
USF1-210ENST00000531842 CTF1Q16619 201 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 CNIH2Q6PI25 160 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 SSX9Q7RTT3 188 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 ZNF575Q86XF7 245 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 OR1L6Q8NGR2 347 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 EEF1AKMT3Q96AZ1 226 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 HSD17B10Q99714 261 aaKnown RBP6.59□□□□□ -1.35
USF1-210ENST00000531842 AUNIPQ9H7T9 357 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 SLC2A9Q9NRM0 540 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 TAS2R8Q9NYW2 309 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 TP53TG1Q9Y2A0 90 aa6.59□□□□□ -1.35
USF1-210ENST00000531842 NPIPB5A8MRT5 1133 aa6.58□□□□□ -1.36
USF1-210ENST00000531842 IGLL5B9A064 214 aa6.58□□□□□ -1.36
USF1-210ENST00000531842 RTL8CO15255 209 aa6.58□□□□□ -1.36
USF1-210ENST00000531842 ZNF207O43670 478 aaKnown RBP6.58□□□□□ -1.36
USF1-210ENST00000531842 HRASP01112 189 aa6.58□□□□□ -1.36
USF1-210ENST00000531842 CLEC3BP05452 202 aa6.58□□□□□ -1.36
USF1-210ENST00000531842 FCER2P06734 321 aa6.58□□□□□ -1.36
USF1-210ENST00000531842 MED14OSP0DP75 135 aa6.58□□□□□ -1.36
USF1-210ENST00000531842 PSMB6P28072 239 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms