RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 PRR20DP86480 221 aa9.82□□□□□ -0.84
HIF3A-214ENST00000531043 PRR20BP86481 221 aa9.82□□□□□ -0.84
HIF3A-214ENST00000531043 PRR20AP86496 221 aa9.82□□□□□ -0.84
HIF3A-214ENST00000531043 RBPMS2Q6ZRY4 209 aaKnown RBP9.82□□□□□ -0.84
HIF3A-214ENST00000531043 VSTM2AQ8TAG5 236 aa9.82□□□□□ -0.84
HIF3A-214ENST00000531043 PHLDA1Q8WV24 401 aaPredicted RBP9.82□□□□□ -0.84
HIF3A-214ENST00000531043 RNF183Q96D59 192 aa9.82□□□□□ -0.84
HIF3A-214ENST00000531043 CCDC90BQ9GZT6 254 aa9.82□□□□□ -0.84
HIF3A-214ENST00000531043 ACOT13Q9NPJ3 140 aa9.82□□□□□ -0.84
HIF3A-214ENST00000531043 KLK5Q9Y337 293 aaPredicted RBP9.82□□□□□ -0.84
HIF3A-214ENST00000531043 IGHV3OR16-8A0A075B7F1 116 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 TRBV7-1A0A0A6YYK4 115 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 TRAV1-2A0A0B4J238 106 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 TMEM235A6NFC5 223 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 EBAG9O00559 213 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 TNFSF12O43508 249 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 DEFA4P12838 97 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 APOC4P55056 127 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 AQP4P55087 323 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 TIMM50Q3ZCQ8 353 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 ZNF773Q6PK81 442 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 MARC2Q969Z3 335 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 HSD17B10Q99714 261 aaKnown RBP9.81□□□□□ -0.84
HIF3A-214ENST00000531043 ZNF436Q9C0F3 470 aaPredicted RBP9.81□□□□□ -0.84
HIF3A-214ENST00000531043 C5orf66Q9H5L9 145 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 MRPL27Q9P0M9 148 aaKnown RBP9.81□□□□□ -0.84
HIF3A-214ENST00000531043 TPRKBQ9Y3C4 175 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 AGRNO00468 2067 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 RYR1P21817 5038 aa9.81□□□□□ -0.84
HIF3A-214ENST00000531043 IGHV3-21A0A0B4J1V1 117 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 METTL21EPA6NDL7 271 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 PDCD5O14737 125 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 ZNF207O43670 478 aaKnown RBP9.8□□□□□ -0.84
HIF3A-214ENST00000531043 HIST1H1BP16401 226 aaKnown RBP9.8□□□□□ -0.84
HIF3A-214ENST00000531043 GALP22466 123 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 ZNF124Q15973 351 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 HACD4Q5VWC8 232 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 CNIH2Q6PI25 160 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 PLET1Q6UQ28 207 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 OR10W1Q8NGF6 305 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 TMEM190Q8WZ59 177 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 ZNF414Q96IQ9 312 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 SPAG8Q99932 426 aaPredicted RBP9.8□□□□□ -0.84
HIF3A-214ENST00000531043 CCL28Q9NRJ3 127 aa9.8□□□□□ -0.84
HIF3A-214ENST00000531043 OR2T8A6NH00 312 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 TSPAN4O14817 238 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 TGOLN2O43493 480 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 DHFRP00374 187 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 CTXN2P0C2S0 81 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 ATF4P18848 351 aaPredicted RBP9.79□□□□□ -0.84
HIF3A-214ENST00000531043 RAB3BP20337 219 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 MFAP2P55001 183 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 PRSS48Q7RTY5 328 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 APRG1Q8IVJ8 170 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 SLC38A6Q8IZM9 456 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 STPG3Q8N7X2 389 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 OR5B3Q8NH48 314 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 NRG4Q8WWG1 115 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 CXorf58Q96LI9 332 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 HRASLSQ9HDD0 168 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 BET1LQ9NYM9 111 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 UFC1Q9Y3C8 167 aa9.79□□□□□ -0.84
HIF3A-214ENST00000531043 KIR2DL5BA0A0G2JN68 375 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 KIR2DL5BA0A0G2JPC4 375 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 F8W735 103 aaPredicted RBP9.78□□□□□ -0.84
HIF3A-214ENST00000531043 SULT1C2O00338 296 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 UPK2O00526 184 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 UBE2CO00762 179 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 SLC22A5O76082 557 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 HRASP01112 189 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 MYL9P24844 172 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 PTBP1P26599 531 aaKnown RBP eCLIP9.78□□□□□ -0.84
HIF3A-214ENST00000531043 ELLP55199 621 aaPredicted RBP9.78□□□□□ -0.84
HIF3A-214ENST00000531043 NANOS2P60321 138 aaKnown RBP9.78□□□□□ -0.84
HIF3A-214ENST00000531043 LGALS9CQ6DKI2 356 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 C22orf42Q6IC83 251 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 ZNF66Q6ZN08 573 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 SPAG16Q8N0X2 631 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 KIR2DL5AQ8N109 375 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 KIR2DL5BQ8NHK3 375 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 SECTM1Q8WVN6 248 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 CHRDL1Q9BU40 450 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 CENPOQ9BU64 300 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 DCSTAMPQ9H295 470 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 MAP6D1Q9H9H5 199 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 ANXA10Q9UJ72 324 aa9.78□□□□□ -0.84
HIF3A-214ENST00000531043 MUC4Q99102 2169 aa9.77□□□□□ -0.85
HIF3A-214ENST00000531043 FCER2P06734 321 aa9.77□□□□□ -0.85
HIF3A-214ENST00000531043 CTSDP07339 412 aaPredicted RBP9.77□□□□□ -0.85
HIF3A-214ENST00000531043 RANBP1P43487 201 aa9.77□□□□□ -0.85
HIF3A-214ENST00000531043 GVQW1Q8N7I0 195 aa9.77□□□□□ -0.85
HIF3A-214ENST00000531043 OR4A5Q8NH83 315 aa9.77□□□□□ -0.85
HIF3A-214ENST00000531043 C20orf24Q9BUV8 137 aa9.77□□□□□ -0.85
HIF3A-214ENST00000531043 TRDV1A0A1B0GX56 115 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 ANKRD65E5RJM6 399 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 DEFB4AO15263 64 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 FCGR2CP31995 323 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 ADMP35318 185 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 GNG2P59768 71 aa9.76□□□□□ -0.85
HIF3A-214ENST00000531043 WT1-ASQ06250 92 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms