RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TIMM50Q3ZCQ8 353 aa11.9□□□□□ -0.5
CPSF1-205ENST00000531042 OR4A47Q6IF82 309 aa11.9□□□□□ -0.5
CPSF1-205ENST00000531042 CLEC19AQ6UXS0 136 aa11.9□□□□□ -0.5
CPSF1-205ENST00000531042 SLC5A7Q9GZV3 580 aa11.9□□□□□ -0.5
CPSF1-205ENST00000531042 DIABLOQ9NR28 239 aa11.9□□□□□ -0.5
CPSF1-205ENST00000531042 S4R3C0 116 aa11.9□□□□□ -0.5
CPSF1-205ENST00000531042 SULT1C2O00338 296 aa11.89□□□□□ -0.51
CPSF1-205ENST00000531042 REG1AP05451 166 aa11.89□□□□□ -0.51
CPSF1-205ENST00000531042 FCER2P06734 321 aa11.89□□□□□ -0.51
CPSF1-205ENST00000531042 TAS2R31P59538 309 aa11.89□□□□□ -0.51
CPSF1-205ENST00000531042 GUCA2BQ16661 112 aa11.89□□□□□ -0.51
CPSF1-205ENST00000531042 DEFB125Q8N687 156 aa11.89□□□□□ -0.51
CPSF1-205ENST00000531042 OR5AP2Q8NGF4 316 aa11.89□□□□□ -0.51
CPSF1-205ENST00000531042 EEF1AKMT3Q96AZ1 226 aa11.89□□□□□ -0.51
CPSF1-205ENST00000531042 HIPK2Q9H2X6 1198 aa11.89□□□□□ -0.51
CPSF1-205ENST00000531042 RETNQ9HD89 108 aa11.89□□□□□ -0.51
CPSF1-205ENST00000531042 HRASLSQ9HDD0 168 aa11.89□□□□□ -0.51
CPSF1-205ENST00000531042 IGLV11-55A0A075B6I3 123 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 RBMY1BA6NDE4 496 aaKnown RBP11.88□□□□□ -0.51
CPSF1-205ENST00000531042 RBMY1EA6NEQ0 496 aaKnown RBP11.88□□□□□ -0.51
CPSF1-205ENST00000531042 OR11H12B2RN74 326 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 HPRT1P00492 218 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 RBMY1DP0C7P1 496 aaKnown RBP11.88□□□□□ -0.51
CPSF1-205ENST00000531042 DEFA4P12838 97 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 CBLN1P23435 193 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 CBX5P45973 191 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 FXYD4P59646 89 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 OR2B8PP59922 312 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 CATR1Q13166 79 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 NEDD8Q15843 81 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 POU2AF1Q16633 256 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 FAM106AQ4KMX7 169 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 ZNF818PQ6ZRF7 136 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 GIMAP1Q8WWP7 306 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 CACNG8Q8WXS5 425 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 WDR89Q96FK6 387 aaPredicted RBP11.88□□□□□ -0.51
CPSF1-205ENST00000531042 WFDC10AQ9H1F0 79 aa11.88□□□□□ -0.51
CPSF1-205ENST00000531042 TRAV3A0A0B4J244 114 aa11.87□□□□□ -0.51
CPSF1-205ENST00000531042 ZNF320A2RRD8 509 aa11.87□□□□□ -0.51
CPSF1-205ENST00000531042 TMEM213A2RRL7 107 aa11.87□□□□□ -0.51
CPSF1-205ENST00000531042 MFSD2BA6NFX1 497 aa11.87□□□□□ -0.51
CPSF1-205ENST00000531042 A8MWP6 167 aa11.87□□□□□ -0.51
CPSF1-205ENST00000531042 UPK2O00526 184 aa11.87□□□□□ -0.51
CPSF1-205ENST00000531042 TMEM127O75204 238 aa11.87□□□□□ -0.51
CPSF1-205ENST00000531042 NQO2P16083 231 aa11.87□□□□□ -0.51
CPSF1-205ENST00000531042 CXorf58Q96LI9 332 aa11.87□□□□□ -0.51
CPSF1-205ENST00000531042 SRD5A3Q9H8P0 318 aa11.87□□□□□ -0.51
CPSF1-205ENST00000531042 BATF3Q9NR55 127 aa11.87□□□□□ -0.51
CPSF1-205ENST00000531042 TRBV7-1A0A0A6YYK4 115 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 IGLC7A0M8Q6 106 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 MEIS3P1A6NDR6 274 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 XRCC3O43542 346 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 CLEC3BP05452 202 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 TMEM17Q86X19 198 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 OR51H1Q8NH63 302 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 CD300LFQ8TDQ1 290 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 FAM110AQ9BQ89 295 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 COMMD5Q9GZQ3 224 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 PLEKHA2Q9HB19 425 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 MLXQ9UH92 298 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 SELENOKQ9Y6D0 94 aa11.86□□□□□ -0.51
CPSF1-205ENST00000531042 DNAH1Q9P2D7 4330 aa11.85□□□□□ -0.51
CPSF1-205ENST00000531042 S1PR2O95136 353 aa11.85□□□□□ -0.51
CPSF1-205ENST00000531042 FGF2P09038 288 aa11.85□□□□□ -0.51
CPSF1-205ENST00000531042 GNRHRP30968 328 aa11.85□□□□□ -0.51
CPSF1-205ENST00000531042 KCTD21Q4G0X4 260 aa11.85□□□□□ -0.51
CPSF1-205ENST00000531042 AADACL3Q5VUY0 350 aa11.85□□□□□ -0.51
CPSF1-205ENST00000531042 ZNF57Q68EA5 555 aaPredicted RBP11.85□□□□□ -0.51
CPSF1-205ENST00000531042 TMEM61Q8N0U2 210 aa11.85□□□□□ -0.51
CPSF1-205ENST00000531042 UXS1Q8NBZ7 420 aa11.85□□□□□ -0.51
CPSF1-205ENST00000531042 DMBX1Q8NFW5 382 aa11.85□□□□□ -0.51
CPSF1-205ENST00000531042 S100A16Q96FQ6 103 aaKnown RBP11.85□□□□□ -0.51
CPSF1-205ENST00000531042 SRSF8Q9BRL6 282 aaKnown RBP11.85□□□□□ -0.51
CPSF1-205ENST00000531042 IFT46Q9NQC8 304 aa11.85□□□□□ -0.51
CPSF1-205ENST00000531042 TMEM140Q9NV12 185 aa11.85□□□□□ -0.51
CPSF1-205ENST00000531042 TGFBR1P36897 503 aa11.84□□□□□ -0.51
CPSF1-205ENST00000531042 HERV-K104P61576 105 aa11.84□□□□□ -0.51
CPSF1-205ENST00000531042 TM4SF20Q53R12 229 aa11.84□□□□□ -0.51
CPSF1-205ENST00000531042 DHRS11Q6UWP2 260 aa11.84□□□□□ -0.51
CPSF1-205ENST00000531042 UNQ9165/PRO28630Q6UXU0 137 aa11.84□□□□□ -0.51
CPSF1-205ENST00000531042 SLC16A13Q7RTY0 426 aa11.84□□□□□ -0.51
CPSF1-205ENST00000531042 CROCCP3Q8IVE0 287 aa11.84□□□□□ -0.51
CPSF1-205ENST00000531042 ZNF502Q8TBZ5 544 aa11.84□□□□□ -0.51
CPSF1-205ENST00000531042 BORCS5Q969J3 196 aa11.84□□□□□ -0.51
CPSF1-205ENST00000531042 EHFQ9NZC4 300 aa11.84□□□□□ -0.51
CPSF1-205ENST00000531042 C8orf88P0DMB2 117 aa11.83□□□□□ -0.52
CPSF1-205ENST00000531042 PTBP1P26599 531 aaKnown RBP eCLIP11.83□□□□□ -0.525e-6■■■□□ 16.4
CPSF1-205ENST00000531042 GPR183P32249 361 aa11.83□□□□□ -0.52
CPSF1-205ENST00000531042 RPS19P39019 145 aaKnown RBP11.83□□□□□ -0.52
CPSF1-205ENST00000531042 RFX2P48378 723 aa11.83□□□□□ -0.52
CPSF1-205ENST00000531042 UBE2NLQ5JXB2 153 aa11.83□□□□□ -0.52
CPSF1-205ENST00000531042 OR10W1Q8NGF6 305 aa11.83□□□□□ -0.52
CPSF1-205ENST00000531042 IL17DQ8TAD2 202 aa11.83□□□□□ -0.52
CPSF1-205ENST00000531042 QTRT1Q9BXR0 403 aaKnown RBP11.83□□□□□ -0.52
CPSF1-205ENST00000531042 COMMD9Q9P000 198 aa11.83□□□□□ -0.52
CPSF1-205ENST00000531042 THYN1Q9P016 225 aa11.83□□□□□ -0.52
CPSF1-205ENST00000531042 ANAPC10Q9UM13 185 aa11.83□□□□□ -0.52
CPSF1-205ENST00000531042 TEX50A0A1B0GTY4 177 aa11.82□□□□□ -0.52
CPSF1-205ENST00000531042 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
CPSF1-205ENST00000531042 SCAF4O95104 1147 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms