RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 RTBDNQ9BSG5 229 aaPredicted RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 KRTAP4-5Q9BYR2 181 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 PARP12Q9H0J9 701 aaKnown RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 MED28Q9H204 178 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 HIPK2Q9H2X6 1198 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 TNFRSF19Q9NS68 423 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.83□□□□□ -1.8
SSBP3-213ENST00000530618 TMEM140Q9NV12 185 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 BET1LQ9NYM9 111 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 THYN1Q9P016 225 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 MMP24Q9Y5R2 645 aa3.83□□□□□ -1.8
SSBP3-213ENST00000530618 BIRC6Q9NR09 4857 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 MDFIC2A0A1B0GVS7 189 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 A6NDX4 124 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 LINC00473A8K010 186 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 FAM25EA8MYX2 175 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 FAM90A26D6RGX4 464 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 L7N2F9 121 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 AP4M1O00189 453 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 CORTO00230 105 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 GPR137BO60478 399 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 S1PR2O95136 353 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 NDUFA3O95167 84 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 IGLV2-14P01704 120 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 IGHV4-59P01825 116 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 HLA-DRB1P01911 266 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 IGKV1-16P04430 117 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 SAA1P0DJI8 122 aaPredicted RBP3.82□□□□□ -1.8
SSBP3-213ENST00000530618 DEFA4P12838 97 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 HLA-GP17693 338 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 BTCP35070 178 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 G6PCP35575 357 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 NUP62P37198 522 aaPredicted RBP3.82□□□□□ -1.8
SSBP3-213ENST00000530618 SNCAP37840 140 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 VDAC2P45880 294 aaPredicted RBP3.82□□□□□ -1.8
SSBP3-213ENST00000530618 RPL27AP46776 148 aaKnown RBP3.82□□□□□ -1.8
SSBP3-213ENST00000530618 HOXA1P49639 335 aaPredicted RBP3.82□□□□□ -1.8
SSBP3-213ENST00000530618 BCAP31P51572 246 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 GNB1P62873 340 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 VAMP2P63027 116 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 SRSF4Q08170 494 aaKnown RBP3.82□□□□□ -1.8
SSBP3-213ENST00000530618 FOXL1Q12952 345 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 TMEM187Q14656 261 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 OXA1LQ15070 435 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 PSG5Q15238 335 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 TNXAQ16473 311 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 LY6EQ16553 131 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 POU2AF1Q16633 256 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 SP6Q3SY56 376 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 TMEM65Q6PI78 240 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 ZNF562Q6V9R5 426 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 SSX9Q7RTT3 188 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 SLC35E3Q7Z769 313 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 TMEM219Q86XT9 240 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 COMMD1Q8N668 190 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 C5orf56Q8N8D9 126 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 ADAD2Q8NCV1 583 aaKnown RBP3.82□□□□□ -1.8
SSBP3-213ENST00000530618 OR4X2Q8NGF9 303 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 OR1L8Q8NGR8 309 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 CFHR4Q92496 578 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 ARPC1AQ92747 370 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 DUX5Q96PT3 197 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 TP53RKQ96S44 253 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 QTRT1Q9BXR0 403 aaKnown RBP3.82□□□□□ -1.8
SSBP3-213ENST00000530618 OR51J1Q9H342 316 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 PLEKHA3Q9HB20 300 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 BEX1Q9HBH7 125 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 COA4Q9NYJ1 87 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 FLVCR2Q9UPI3 526 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 FOXA2Q9Y261 457 aaPredicted RBP3.82□□□□□ -1.8
SSBP3-213ENST00000530618 ZNF257Q9Y2Q1 563 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 SIGLEC9Q9Y336 463 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 OR51B2Q9Y5P1 312 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 TMEM56-RWDD3S4R434 201 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 HYDINQ4G0P3 5121 aa3.82□□□□□ -1.8
SSBP3-213ENST00000530618 TENM3Q9P273 2699 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 C13orf42A0A1B0GVH6 325 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 RPS10-NUDT3A0A1W2PQS6 291 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 C15orf61A6NNL5 157 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 CEBPZOSA8MTT3 80 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 UPK2O00526 184 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 GOSR2O14653 212 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 RAMP3O60896 148 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 NDUFA7O95182 113 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 CA2P00918 260 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 HOXB5P09067 269 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 TRAPPC2P0DI81 140 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 TRAPPC2BP0DI82 140 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 HIST1H1BP16401 226 aaKnown RBP3.81□□□□□ -1.8
SSBP3-213ENST00000530618 MDKP21741 143 aaPredicted RBP3.81□□□□□ -1.8
SSBP3-213ENST00000530618 CD24P25063 80 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 ATP5IP56385 69 aaPredicted RBP3.81□□□□□ -1.8
SSBP3-213ENST00000530618 SPCS3P61009 180 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 RAB11AP62491 216 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 RPL30P62888 115 aaKnown RBP3.81□□□□□ -1.8
SSBP3-213ENST00000530618 IFITM3Q01628 133 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 EIF4EBP1Q13541 118 aaPredicted RBP3.81□□□□□ -1.8
SSBP3-213ENST00000530618 DIAPH2-AS1Q14236 149 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 FXYD3Q14802 87 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 PRSS8Q16651 343 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms