RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	TIMM50	Q3ZCQ8	353 aa		11.65	□□□□□ -0.54
TM9SF1-209	ENST00000530468	BTNL8	Q6UX41	500 aa		11.65	□□□□□ -0.54
TM9SF1-209	ENST00000530468	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.65	□□□□□ -0.54
TM9SF1-209	ENST00000530468	TPRA1	Q86W33	373 aa		11.65	□□□□□ -0.54
TM9SF1-209	ENST00000530468	ZBTB34	Q8NCN2	500 aa		11.65	□□□□□ -0.54
TM9SF1-209	ENST00000530468	CNBD2	Q96M20	576 aa		11.65	□□□□□ -0.54
TM9SF1-209	ENST00000530468	SRSF8	Q9BRL6	282 aa	Known RBP	11.65	□□□□□ -0.54
TM9SF1-209	ENST00000530468	MRPL27	Q9P0M9	148 aa	Known RBP	11.65	□□□□□ -0.54
TM9SF1-209	ENST00000530468	UFC1	Q9Y3C8	167 aa		11.65	□□□□□ -0.54
TM9SF1-209	ENST00000530468	PLEC	Q15149	4684 aa	Known RBP	11.65	□□□□□ -0.54
TM9SF1-209	ENST00000530468	SSX5	O60225	188 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	MRPS14	O60783	128 aa	Known RBP	11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	REG1A	P05451	166 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	ELL	P55199	621 aa	Predicted RBP	11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	ARPC4	P59998	168 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	TM4SF20	Q53R12	229 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	SPAG16	Q8N0X2	631 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	OR1L6	Q8NGR2	347 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	ZNF502	Q8TBZ5	544 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	SECTM1	Q8WVN6	248 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	LINC00476	Q8WZB0	136 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	HRASLS	Q9HDD0	168 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	TXNL4B	Q9NX01	149 aa	Known RBP	11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	THYN1	Q9P016	225 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	DAPK2	Q9UIK4	370 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	SELENOK	Q9Y6D0	94 aa		11.64	□□□□□ -0.55
TM9SF1-209	ENST00000530468	CGB1	A6NKQ9	187 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	TNFSF12	O43508	249 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	FGF2	P09038	288 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	MYOD1	P15172	320 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	GPR183	P32249	361 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	TAS2R31	P59538	309 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	OR2B8P	P59922	312 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	GABARAPL2	P60520	117 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	CATR1	Q13166	79 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	POU2AF1	Q16633	256 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	UBE2U	Q5VVX9	321 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	SFXN4	Q6P4A7	337 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	PLET1	Q6UQ28	207 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	UNQ9165/PRO28630	Q6UXU0	137 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	WFDC3	Q8IUB2	231 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	SLC38A6	Q8IZM9	456 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	BEST4	Q8NFU0	473 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	OR13F1	Q8NGS4	319 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	LGALS14	Q8TCE9	139 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	GPHA2	Q96T91	129 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	CCL28	Q9NRJ3	127 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	RHBDL2	Q9NX52	303 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	TP53TG1	Q9Y2A0	90 aa		11.63	□□□□□ -0.55
TM9SF1-209	ENST00000530468	ALMS1	Q8TCU4	4167 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	IGLC7	A0M8Q6	106 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	NUPR2	A6NF83	97 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	CYB5B	O43169	146 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	HPRT1	P00492	218 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	NQO2	P16083	231 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	PTBP1	P26599	531 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	FCGR2C	P31995	323 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	APOC4	P55056	127 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	SCAND1	P57086	179 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	ZNF585B	Q52M93	769 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	THOC7	Q6I9Y2	204 aa	Known RBP	11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	OR2C3	Q8N628	320 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	SPAG8	Q99932	426 aa	Predicted RBP	11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	COMMD5	Q9GZQ3	224 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	C5orf66	Q9H5L9	145 aa		11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	RRP15	Q9Y3B9	282 aa	Known RBP	11.62	□□□□□ -0.55
TM9SF1-209	ENST00000530468	CXorf65	A6NEN9	183 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	UPK2	O00526	184 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	PPY	P01298	95 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	PSMB9	P28065	219 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	BMI1	P35226	326 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	TNFRSF9	Q07011	255 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468		Q6ZWC4	215 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	HOGA1	Q86XE5	327 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	CD300LF	Q8TDQ1	290 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	VN1R17P	Q8TDU5	208 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	FCGR1B	Q92637	280 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	QTRT1	Q9BXR0	403 aa	Known RBP	11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	SLC5A7	Q9GZV3	580 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	SSR3	Q9UNL2	185 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468	ETV7	Q9Y603	341 aa		11.61	□□□□□ -0.55
TM9SF1-209	ENST00000530468		A0A0A6YYH2	397 aa		11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468		A6NJ64	397 aa		11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468	SULT1C2	O00338	296 aa		11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468	UBE2C	O00762	179 aa		11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468	TGOLN2	O43493	480 aa		11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468	ATF4	P18848	351 aa	Predicted RBP	11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468	PMS2P11	Q13670	270 aa		11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468	GVQW1	Q8N7I0	195 aa		11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468	TMEM190	Q8WZ59	177 aa		11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468	PLEKHA2	Q9HB19	425 aa		11.6	□□□□□ -0.55
TM9SF1-209	ENST00000530468	TRAV18	A0A075B6X5	111 aa		11.59	□□□□□ -0.55
TM9SF1-209	ENST00000530468	TRAV3	A0A0B4J244	114 aa		11.59	□□□□□ -0.55
TM9SF1-209	ENST00000530468		A0A0J9YWU9	116 aa		11.59	□□□□□ -0.55
TM9SF1-209	ENST00000530468	TSPAN4	O14817	238 aa		11.59	□□□□□ -0.55
TM9SF1-209	ENST00000530468	SPRY2	O43597	315 aa		11.59	□□□□□ -0.55
TM9SF1-209	ENST00000530468	LY6G6C	O95867	125 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms