RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 FAM71E2Q8N5Q1 922 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 Q8N9W7 124 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 GRPEL2Q8TAA5 225 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 C2orf50Q96LR7 162 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 RBM14Q96PK6 669 aaKnown RBP8.47□□□□□ -1.05
SOX6-213ENST00000530378 SPIN2AQ99865 258 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 SPIN2BQ9BPZ2 258 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 FAM103A1Q9BTL3 118 aaKnown RBP8.47□□□□□ -1.05
SOX6-213ENST00000530378 BET1LQ9NYM9 111 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 OR51B2Q9Y5P1 312 aa8.47□□□□□ -1.05
SOX6-213ENST00000530378 SSSCA1O60232 199 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 NDUFA3O95167 84 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 SPDEFO95238 335 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 IFNA17P01571 189 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 CRYGBP07316 175 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 IAPPP10997 89 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 HLA-GP17693 338 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 NDPQ00604 133 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 PRSS8Q16651 343 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 Q5BKY6 102 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 Q6ZS46 218 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 C5orf56Q8N8D9 126 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 NPBQ8NG41 125 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 VSTM2AQ8TAG5 236 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 TMEM167AQ8TBQ9 72 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 RASL11BQ9BPW5 248 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 HSPB9Q9BQS6 159 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 DNHD1Q96M86 4753 aa8.46□□□□□ -1.06
SOX6-213ENST00000530378 A0A1B0GU03 582 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 E7EUB6 86 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 CNIH1O95406 144 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 MBPP02686 304 aaPredicted RBP8.45□□□□□ -1.06
SOX6-213ENST00000530378 AMY1AP04745 511 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 POLR2GP62487 172 aaKnown RBP eCLIP8.45□□□□□ -1.06
SOX6-213ENST00000530378 BLCAPP62952 87 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 SSBP2P81877 361 aaPredicted RBP8.45□□□□□ -1.06
SOX6-213ENST00000530378 RAB32Q13637 225 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 AANATQ16613 207 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 TMEM95Q3KNT9 176 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 C19orf35Q6ZS72 473 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 TEX45Q8NA69 505 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 OR10W1Q8NGF6 305 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 OR4D5Q8NGN0 318 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 OR2T35Q8NGX2 323 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 OR5R1Q8NH85 324 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 PPP1R1CQ8WVI7 109 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 ST6GAL2Q96JF0 529 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 AIFM2Q9BRQ8 373 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 COMMD5Q9GZQ3 224 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.45□□□□□ -1.06
SOX6-213ENST00000530378 C1RLQ9NZP8 487 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 PITPNC1Q9UKF7 332 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 A0A1B0GW64 132 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 LINC01548A6NM66 108 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 CEBPZOSA8MTT3 80 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 H3BP45 60 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 KCNAB3O43448 404 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 PFDN1O60925 122 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 PITX3O75364 302 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 ACTL6BO94805 426 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 REG1AP05451 166 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 IL6RP08887 468 aaPredicted RBP8.45□□□□□ -1.06
SOX6-213ENST00000530378 GIPP09681 153 aaPredicted RBP8.45□□□□□ -1.06
SOX6-213ENST00000530378 NKX2-1P43699 371 aaPredicted RBP8.45□□□□□ -1.06
SOX6-213ENST00000530378 MMD2Q8IY49 270 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 RNF5Q99942 180 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 RBKSQ9H477 322 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 PARP11Q9NR21 331 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 TMEM14BQ9NUH8 114 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 LINC00527Q9UJ94 153 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 RCL1Q9Y2P8 373 aaKnown RBP8.45□□□□□ -1.06
SOX6-213ENST00000530378 FBXO7Q9Y3I1 522 aa8.45□□□□□ -1.06
SOX6-213ENST00000530378 TEX50A0A1B0GTY4 177 aa8.44□□□□□ -1.06
SOX6-213ENST00000530378 GPR137BO60478 399 aa8.44□□□□□ -1.06
SOX6-213ENST00000530378 CRLF1O75462 422 aa8.44□□□□□ -1.06
SOX6-213ENST00000530378 TRAPPC2P0DI81 140 aa8.44□□□□□ -1.06
SOX6-213ENST00000530378 TRAPPC2BP0DI82 140 aa8.44□□□□□ -1.06
SOX6-213ENST00000530378 HOXA1P49639 335 aaPredicted RBP8.44□□□□□ -1.06
SOX6-213ENST00000530378 SCGB2A2Q13296 93 aa8.44□□□□□ -1.06
SOX6-213ENST00000530378 PRDM13Q9H4Q3 707 aa8.44□□□□□ -1.06
SOX6-213ENST00000530378 PRNDQ9UKY0 176 aa8.44□□□□□ -1.06
SOX6-213ENST00000530378 FOXA2Q9Y261 457 aaPredicted RBP8.44□□□□□ -1.06
SOX6-213ENST00000530378 IGHV7-81A0A0B4J1V7 117 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 PIGBOS1A0A0B4J2F0 54 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 CGB1A6NKQ9 187 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 K7EPK0 472 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 WRBO00258 174 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 FAM157CP0CG43 387 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 RPL27AP46776 148 aaKnown RBP8.43□□□□□ -1.06
SOX6-213ENST00000530378 COMPP49747 757 aaPredicted RBP8.43□□□□□ -1.06
SOX6-213ENST00000530378 CX3CL1P78423 397 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 TNFRSF9Q07011 255 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 FXYD3Q14802 87 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 ECSCRQ19T08 205 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 OR8H1Q8NGG4 311 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 OR4A5Q8NH83 315 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 ZNF418Q8TF45 676 aaPredicted RBP8.43□□□□□ -1.06
SOX6-213ENST00000530378 SRSF12Q8WXF0 261 aaKnown RBP8.43□□□□□ -1.06
SOX6-213ENST00000530378 ARPC1AQ92747 370 aa8.43□□□□□ -1.06
SOX6-213ENST00000530378 NEURL2Q9BR09 285 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms