RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 NDUFA11Q86Y39 141 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 C11orf44Q8N8P7 122 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 UXS1Q8NBZ7 420 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 LFNGQ8NES3 379 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 OR4A5Q8NH83 315 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 GRPEL2Q8TAA5 225 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 SRSF12Q8WXF0 261 aaKnown RBP4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 GALNT14Q96FL9 552 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 TMEM68Q96MH6 324 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 MARVELD1Q9BSK0 173 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 TMEM222Q9H0R3 208 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 NAA60Q9H7X0 242 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 TMEM140Q9NV12 185 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 NUDT15Q9NV35 164 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 FLVCR2Q9UPI3 526 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 FOXA2Q9Y261 457 aaPredicted RBP4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 KCNIP3Q9Y2W7 256 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 WSB1Q9Y6I7 421 aa4.43□□□□□ -1.7
RPUSD4-204ENST00000530036 TRAV3A0A0B4J244 114 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 TEX13DA0A0J9YY54 714 aaPredicted RBP4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 A0A1W2PN81 502 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 CGB1A6NKQ9 187 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 C15orf61A6NNL5 157 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 TEX22C9J3V5 150 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 E7EUB6 86 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 M0QZ24 198 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 UPK2O00526 184 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 SSNA1O43805 119 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 PRAF2O60831 178 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 PFDN1O60925 122 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 CNIH1O95406 144 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 BRI3O95415 125 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 CDS2O95674 445 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 TSPAN15O95858 294 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 KRASP01116 189 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 IGKV1-5P01602 117 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 OPN1MWP04001 364 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 RPLP1P05386 114 aaKnown RBP4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 SERPINE2P07093 398 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 OR5AC1P0C628 307 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 OR9G9P0C7N8 305 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 OPN1MW2P0DN77 364 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 OPN1MW3P0DN78 364 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 HLA-GP17693 338 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 G6PCP35575 357 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 CHRNA7P36544 502 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 RPL27AP46776 148 aaKnown RBP4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 OR2B8PP59922 312 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 ERVK-16P61578 105 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 RPL23AP62750 156 aaKnown RBP4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 GNB1P62873 340 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 DHODHQ02127 395 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 TMEM267Q0VDI3 215 aaPredicted RBP4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 KIAA0141Q14154 515 aaPredicted RBP4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 C2orf68Q2NKX9 166 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 TMEM128Q5BJH2 165 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 CXorf66Q5JRM2 361 aaPredicted RBP4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 PRR31Q5SQ13 230 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 UNQ5815/PRO19632Q6UWF5 114 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 LCNL1Q6ZST4 164 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 SGPP2Q8IWX5 399 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 ADAD2Q8NCV1 583 aaKnown RBP4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 DMBX1Q8NFW5 382 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 OR5M8Q8NGP6 311 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 LHFPL5Q8TAF8 219 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 FAM110DQ8TAY7 271 aaPredicted RBP4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 ABHD5Q8WTS1 349 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 GLYATL2Q8WU03 294 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 SPIN2AQ99865 258 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 SPIN2BQ9BPZ2 258 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 C20orf85Q9H1P6 137 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 ZFP57Q9NU63 452 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 TSSC4Q9Y5U2 329 aaPredicted RBP4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 MEGF8Q7Z7M0 2845 aa4.42□□□□□ -1.7
RPUSD4-204ENST00000530036 NOTCH3Q9UM47 2321 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 A0A0G2JRQ6 117 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 TCRBV4S1A1TA0A5B7 111 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 IGLC7A0M8Q6 106 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 MSGN1A6NI15 193 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 DBX1A6NMT0 343 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 H3BUA1 57 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 ACTL6BO94805 426 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 IL5P05113 134 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 OR4E1P0C645 316 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 ANXA3P12429 323 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 MYOD1P15172 320 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 ANXA7P20073 488 aaKnown RBP4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 VAMP1P23763 118 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 CDX1P47902 265 aaPredicted RBP4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 UBE2MP61081 183 aaKnown RBP4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 TMEM187Q14656 261 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 TATDN3Q17R31 274 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 KLK9Q2XQG4 91 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 NSUN5P1Q3KNT7 163 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 SP6Q3SY56 376 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 AARDQ4LEZ3 155 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 THOC7Q6I9Y2 204 aaKnown RBP4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 SLC25A42Q86VD7 318 aa4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 RBPMSQ93062 196 aaKnown RBP4.41□□□□□ -1.7
RPUSD4-204ENST00000530036 IL22RA2Q969J5 263 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms