RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 TRAV40A0A0B4J280 105 aa12.3□□□□□ -0.44
ATM-212ENST00000527805 DUTP33316 252 aaKnown RBP12.3□□□□□ -0.44
ATM-212ENST00000527805 SRSF7Q16629 238 aaKnown RBP eCLIP12.3□□□□□ -0.449e-6■■■■□ 21.6
ATM-212ENST00000527805 HSD17B13Q7Z5P4 300 aaPredicted RBP12.3□□□□□ -0.44
ATM-212ENST00000527805 F12P00748 615 aaPredicted RBP12.3□□□□□ -0.44
ATM-212ENST00000527805 IGHV1-8P0DP01 117 aa12.3□□□□□ -0.44
ATM-212ENST00000527805 MFAP4P55083 255 aa12.3□□□□□ -0.44
ATM-212ENST00000527805 CHRDL1Q9BU40 450 aa12.3□□□□□ -0.44
ATM-212ENST00000527805 TMEM56-RWDD3S4R434 201 aa12.3□□□□□ -0.44
ATM-212ENST00000527805 RAMP3O60896 148 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 C1QL1O75973 258 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 CD8AP01732 235 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 SEM1Q6ZVN7 128 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 PPP5D1E7EU14 171 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 CA2P00918 260 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 ERVFC1-1P60608 527 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 MIC13Q5XKP0 118 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 STXBP6Q8NFX7 210 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 HIGD1AQ9Y241 93 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 IGLV3-9A0A075B6K5 115 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 ZNF430Q9H8G1 570 aaPredicted RBP12.29□□□□□ -0.44
ATM-212ENST00000527805 PRR14LQ5THK1 2151 aa12.29□□□□□ -0.44
ATM-212ENST00000527805 KIAA1324LA8MWY0 1029 aaPredicted RBP12.28□□□□□ -0.44
ATM-212ENST00000527805 SAA1P0DJI8 122 aaPredicted RBP12.28□□□□□ -0.44
ATM-212ENST00000527805 WDR86Q86TI4 376 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 LHFPL1Q86WI0 220 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 NPIPB3Q92617 1050 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 XKRY2A2RUG3 117 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 C11orf94C9JXX5 98 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 TIMM23O14925 209 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 RD3LP0DJH9 198 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 TDGF1P3P51864 188 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 HOXA4Q00056 320 aaPredicted RBP12.28□□□□□ -0.44
ATM-212ENST00000527805 SLC16A13Q7RTY0 426 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 CENPVQ7Z7K6 275 aaPredicted RBP12.28□□□□□ -0.44
ATM-212ENST00000527805 TOLLIPQ9H0E2 274 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 RABAC1Q9UI14 185 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 RANBP2P49792 3224 aaKnown RBP12.28□□□□□ -0.44
ATM-212ENST00000527805 IGHV2-26A0A0B4J1V2 119 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 RAB19A4D1S5 217 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 GAMTQ14353 236 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 HLA-DRB5Q30154 266 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 C1orf147Q96MC9 270 aaPredicted RBP12.28□□□□□ -0.44
ATM-212ENST00000527805 IGHV3-35A0A0C4DH35 117 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 PAGE4O60829 102 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
ATM-212ENST00000527805 B4DSR2 109 aa12.27□□□□□ -0.44
ATM-212ENST00000527805 GATA4P43694 442 aa12.27□□□□□ -0.44
ATM-212ENST00000527805 TNFRSF14Q92956 283 aa12.27□□□□□ -0.44
ATM-212ENST00000527805 GNG4P50150 75 aa12.27□□□□□ -0.44
ATM-212ENST00000527805 TMEM241Q24JQ0 296 aa12.27□□□□□ -0.44
ATM-212ENST00000527805 ZNF660Q6AZW8 331 aaPredicted RBP12.27□□□□□ -0.44
ATM-212ENST00000527805 MANBALQ9NQG1 85 aa12.27□□□□□ -0.44
ATM-212ENST00000527805 TRAF4Q9BUZ4 470 aaPredicted RBP12.27□□□□□ -0.45
ATM-212ENST00000527805 SAMD10Q9BYL1 202 aa12.27□□□□□ -0.45
ATM-212ENST00000527805 CXorf1O96002 111 aa12.27□□□□□ -0.45
ATM-212ENST00000527805 KLRD1Q13241 179 aa12.27□□□□□ -0.45
ATM-212ENST00000527805 TMEM88Q6PEY1 159 aa12.27□□□□□ -0.45
ATM-212ENST00000527805 EAF1Q96JC9 268 aaPredicted RBP12.27□□□□□ -0.45
ATM-212ENST00000527805 TRBV6-6A0A0A6YYG2 114 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 MSGN1A6NI15 193 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 NBR2O15453 112 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 S100A4P26447 101 aaKnown RBP12.26□□□□□ -0.45
ATM-212ENST00000527805 WFDC3Q8IUB2 231 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 DYNLRB2Q8TF09 96 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 MYO18BQ8IUG5 2567 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 A0A1W2PPQ1 181 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 RBFOX2O43251 390 aaKnown RBP eCLIP12.26□□□□□ -0.45
ATM-212ENST00000527805 ATP5IP56385 69 aaPredicted RBP12.26□□□□□ -0.45
ATM-212ENST00000527805 EFNB3Q15768 340 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 TMEM155Q4W5P6 130 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 DMRTA2Q96SC8 542 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 FAM103A1Q9BTL3 118 aaKnown RBP12.26□□□□□ -0.45
ATM-212ENST00000527805 IGSF23A1L1A6 192 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 OR2J3O76001 311 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 ATP5G2Q06055 141 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 VMO1Q7Z5L0 202 aa12.26□□□□□ -0.45
ATM-212ENST00000527805 IGLV3-1P01715 115 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 FAM157CP0CG43 387 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 CFPP27918 469 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 RANP62826 216 aaKnown RBP12.25□□□□□ -0.45
ATM-212ENST00000527805 KHDC3LQ587J8 217 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 SSX7Q7RTT5 188 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 PAXXQ9BUH6 204 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 VAX2Q9UIW0 290 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 CCDC168Q8NDH2 2452 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 ARPC1AQ92747 370 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 CLEC5AQ9NY25 188 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 NOTCH3Q9UM47 2321 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 UPK2O00526 184 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 SULT1A2P50226 295 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 PPP1R27Q86WC6 154 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 LDLRAD3Q86YD5 345 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 S4R3C0 116 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 TPPP2P59282 170 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 PAX5Q02548 391 aa12.25□□□□□ -0.45
ATM-212ENST00000527805 TRGV3P03979 118 aa12.24□□□□□ -0.45
ATM-212ENST00000527805 Q8TCH9 128 aa12.24□□□□□ -0.45
ATM-212ENST00000527805 CHEK1O14757 476 aa12.24□□□□□ -0.45
ATM-212ENST00000527805 EIF3GO75821 320 aaKnown RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms