RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 DBX1A6NMT0 343 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 ZNF705GA8MUZ8 300 aaPredicted RBP12.54□□□□□ -0.4
USP47-207ENST00000527733 FAM157CP0CG43 387 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 RD3LP0DJH9 198 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 DSCR9P59020 149 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 WDR25Q64LD2 544 aaPredicted RBP12.54□□□□□ -0.4
USP47-207ENST00000527733 PAXXQ9BUH6 204 aa12.54□□□□□ -0.4
USP47-207ENST00000527733 TRAV30A0A087WSZ9 112 aa12.53□□□□□ -0.4
USP47-207ENST00000527733 BSXQ3C1V8 233 aa12.53□□□□□ -0.4
USP47-207ENST00000527733 NAT8Q9UHE5 227 aa12.53□□□□□ -0.4
USP47-207ENST00000527733 PDE6DO43924 150 aa12.53□□□□□ -0.4
USP47-207ENST00000527733 MOSP00540 346 aa12.53□□□□□ -0.4
USP47-207ENST00000527733 CTRB1P17538 263 aa12.53□□□□□ -0.4
USP47-207ENST00000527733 DLK1P80370 383 aa12.53□□□□□ -0.4
USP47-207ENST00000527733 CTRB2Q6GPI1 263 aa12.53□□□□□ -0.4
USP47-207ENST00000527733 HSBP1L1C9JCN9 74 aa12.53□□□□□ -0.4
USP47-207ENST00000527733 G3V3Q6 166 aa12.53□□□□□ -0.4
USP47-207ENST00000527733 CFDP00746 253 aaPredicted RBP12.53□□□□□ -0.4
USP47-207ENST00000527733 CA2P00918 260 aa12.53□□□□□ -0.4
USP47-207ENST00000527733 DUTP33316 252 aaKnown RBP12.53□□□□□ -0.4
USP47-207ENST00000527733 IGKV1D-17A0A075B6S4 117 aa12.52□□□□□ -0.4
USP47-207ENST00000527733 FABP9Q0Z7S8 132 aa12.52□□□□□ -0.4
USP47-207ENST00000527733 ANKHD1Q8IWZ3 2542 aaKnown RBP12.52□□□□□ -0.4
USP47-207ENST00000527733 CREBBPQ92793 2442 aa12.52□□□□□ -0.4
USP47-207ENST00000527733 NOTCH2Q04721 2471 aa12.52□□□□□ -0.4
USP47-207ENST00000527733 IGKV3-7A0A075B6H7 116 aa12.52□□□□□ -0.4
USP47-207ENST00000527733 GATCO43716 136 aaKnown RBP12.52□□□□□ -0.4
USP47-207ENST00000527733 GALR1P47211 349 aa12.52□□□□□ -0.4
USP47-207ENST00000527733 SMDT1Q9H4I9 107 aa12.52□□□□□ -0.4
USP47-207ENST00000527733 DENND4AQ7Z401 1863 aa12.52□□□□□ -0.41
USP47-207ENST00000527733 IGF2RP11717 2491 aa12.52□□□□□ -0.41
USP47-207ENST00000527733 IGSF23A1L1A6 192 aa12.52□□□□□ -0.41
USP47-207ENST00000527733 PQLC2Q6ZP29 291 aa12.52□□□□□ -0.41
USP47-207ENST00000527733 NPIPB3Q92617 1050 aa12.52□□□□□ -0.41
USP47-207ENST00000527733 DOCK10Q96BY6 2186 aa12.52□□□□□ -0.41
USP47-207ENST00000527733 WDR87Q6ZQQ6 2873 aa12.52□□□□□ -0.41
USP47-207ENST00000527733 PRB3Q04118 309 aaPredicted RBP12.52□□□□□ -0.41
USP47-207ENST00000527733 MSGN1A6NI15 193 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 PLAUP00749 431 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 TMEM200BQ69YZ2 307 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 C18orf12Q96KH6 178 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 RAB4AP20338 218 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 TUSC1Q2TAM9 212 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 SSC4DQ8WTU2 575 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 COQ2Q96H96 371 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 MS4A10Q96PG2 267 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 BCL2P10415 239 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 SUMO1P63165 101 aaKnown RBP12.51□□□□□ -0.41
USP47-207ENST00000527733 USF2Q15853 346 aaPredicted RBP12.51□□□□□ -0.41
USP47-207ENST00000527733 SSX7Q7RTT5 188 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 GAFA1Q96PS6 74 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 SEC11CQ9BY50 192 aa12.51□□□□□ -0.41
USP47-207ENST00000527733 SAA1P0DJI8 122 aaPredicted RBP12.5□□□□□ -0.41
USP47-207ENST00000527733 RANP62826 216 aaKnown RBP12.5□□□□□ -0.41
USP47-207ENST00000527733 PAFAH1B2P68402 229 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 GAMTQ14353 236 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 FAM74A3Q4VXF1 159 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 DNAJC4Q9NNZ3 241 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 ZNF581Q9P0T4 197 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 KIAA1324LA8MWY0 1029 aaPredicted RBP12.5□□□□□ -0.41
USP47-207ENST00000527733 HELTA6NFD8 242 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 BMPR1BO00238 502 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 Q6ZR03 302 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 OR5AU1Q8NGC0 362 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 RABAC1Q9UI14 185 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 TMEM131Q92545 1883 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 UPK2O00526 184 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 COL8A2P25067 703 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 Q6ZS49 121 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 LRTM2Q8N967 370 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 RAB24Q969Q5 203 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 LINC00052Q96N35 136 aa12.5□□□□□ -0.41
USP47-207ENST00000527733 RAMP3O60896 148 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 IGHV3-48P01763 117 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 ZNF273Q14593 569 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 LY6G6FQ5SQ64 297 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 BPIFA4PQ86YQ2 179 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 TXNDC17Q9BRA2 123 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 GGACTQ9BVM4 153 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 IGHV1-8P0DP01 117 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 HIST1H1BP16401 226 aaKnown RBP12.49□□□□□ -0.41
USP47-207ENST00000527733 ATP5G2Q06055 141 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 PSMG3Q9BT73 122 aaPredicted RBP12.49□□□□□ -0.41
USP47-207ENST00000527733 NBR2O15453 112 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 GATA4P43694 442 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 DYNLRB2Q8TF09 96 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 C1orf147Q96MC9 270 aaPredicted RBP12.49□□□□□ -0.41
USP47-207ENST00000527733 METTL26Q96S19 204 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 IFI27L2Q9H2X8 130 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 DKK4Q9UBT3 224 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 LY6HO94772 140 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 HS3ST6Q96QI5 342 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 C19orf24Q9BVV8 132 aa12.49□□□□□ -0.41
USP47-207ENST00000527733 A0A1W2PS18 150 aa12.48□□□□□ -0.41
USP47-207ENST00000527733 CLRN3Q8NCR9 226 aa12.48□□□□□ -0.41
USP47-207ENST00000527733 TMEM204Q9BSN7 226 aa12.48□□□□□ -0.41
USP47-207ENST00000527733 C20orf202A1L168 122 aa12.48□□□□□ -0.41
USP47-207ENST00000527733 C8orf88P0DMB2 117 aa12.48□□□□□ -0.41
USP47-207ENST00000527733 AWAT1Q58HT5 328 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms