RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 FKBP11Q9NYL4 201 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 ATP5IP56385 69 aaPredicted RBP12.95□□□□□ -0.34
USH1C-204ENST00000526313 LY6DQ14210 128 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 SLC24A4Q8NFF2 622 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 C1orf159Q96HA4 380 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 P2RX4Q99571 388 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 PCGF1Q9BSM1 259 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 RPS10P5Q9NQ39 176 aa12.95□□□□□ -0.34
USH1C-204ENST00000526313 LSM4Q9Y4Z0 139 aaKnown RBP12.95□□□□□ -0.34
USH1C-204ENST00000526313 TEX50A0A1B0GTY4 177 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 FNDC10F2Z333 226 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 NDUFS6O75380 124 aaKnown RBP12.94□□□□□ -0.34
USH1C-204ENST00000526313 SNRNP70P08621 437 aaKnown RBP12.94□□□□□ -0.34
USH1C-204ENST00000526313 FBP1P09467 338 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 SAA1P0DJI8 122 aaPredicted RBP12.94□□□□□ -0.34
USH1C-204ENST00000526313 MYOD1P15172 320 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 NPY1RP25929 384 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 C11orf71Q6IPW1 123 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 PDPNQ86YL7 162 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 OR10X1Q8NGY0 326 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 LHX4Q969G2 390 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 ACTR3CQ9C0K3 210 aaPredicted RBP12.94□□□□□ -0.34
USH1C-204ENST00000526313 TMEM133Q9H2Q1 129 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 SEC14L6B5MCN3 397 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 M0R036 132 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 DIAPH2-AS1Q14236 149 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 HNF4GQ14541 408 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 TMEM249Q2WGJ8 235 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 OR5B3Q8NH48 314 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 C8orf46Q8TAG6 207 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 TNFRSF14Q92956 283 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 VAX2Q9UIW0 290 aa12.94□□□□□ -0.34
USH1C-204ENST00000526313 H3BQ15 152 aa12.93□□□□□ -0.34
USH1C-204ENST00000526313 CA2P00918 260 aa12.93□□□□□ -0.34
USH1C-204ENST00000526313 PLA2G5P39877 138 aa12.93□□□□□ -0.34
USH1C-204ENST00000526313 OPRK1P41145 380 aa12.93□□□□□ -0.34
USH1C-204ENST00000526313 BSXQ3C1V8 233 aa12.93□□□□□ -0.34
USH1C-204ENST00000526313 ACOT6Q3I5F7 207 aaPredicted RBP12.93□□□□□ -0.34
USH1C-204ENST00000526313 C15orf54Q8N8G6 183 aa12.93□□□□□ -0.34
USH1C-204ENST00000526313 FLYWCH2Q96CP2 140 aaKnown RBP12.93□□□□□ -0.34
USH1C-204ENST00000526313 NPVFQ9HCQ7 196 aa12.93□□□□□ -0.34
USH1C-204ENST00000526313 ENY2Q9NPA8 101 aa12.93□□□□□ -0.34
USH1C-204ENST00000526313 CBLN4Q9NTU7 201 aa12.93□□□□□ -0.34
USH1C-204ENST00000526313 TNCP24821 2201 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 ZFP92A6NM28 416 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 INS-IGF2F8WCM5 200 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 H7C2Y5 167 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 CYB5BO43169 146 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 RBP4P02753 201 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 IFNA4P05014 189 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 FAM90A2PQ658T7 463 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 RBMS3Q6XE24 437 aaKnown RBP12.92□□□□□ -0.34
USH1C-204ENST00000526313 OR4C13Q8NGP0 309 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 OR4A5Q8NH83 315 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 RAB24Q969Q5 203 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 MGST2Q99735 147 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 C20orf24Q9BUV8 137 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 RAB1BQ9H0U4 201 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 PUS1Q9Y606 427 aaKnown RBP eCLIP12.92□□□□□ -0.34
USH1C-204ENST00000526313 NCOR2Q9Y618 2525 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 CHD8Q9HCK8 2581 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 RELNP78509 3460 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 IFNA1P01562 189 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 AKR1C3P42330 323 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 ARSJQ5FYB0 599 aaPredicted RBP12.92□□□□□ -0.34
USH1C-204ENST00000526313 TMEM167AQ8TBQ9 72 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 RAB1CQ92928 201 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 HARBI1Q96MB7 349 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 SLC25A22Q9H936 323 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 PLEKHA3Q9HB20 300 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 NBASA2RRP1 2371 aa12.92□□□□□ -0.34
USH1C-204ENST00000526313 ABCA4P78363 2273 aa12.91□□□□□ -0.34
USH1C-204ENST00000526313 YIF1AO95070 293 aa12.91□□□□□ -0.34
USH1C-204ENST00000526313 IGLV1-47P01700 117 aa12.91□□□□□ -0.34
USH1C-204ENST00000526313 IGLV2-23P01705 113 aa12.91□□□□□ -0.34
USH1C-204ENST00000526313 TAGLN2P37802 199 aaKnown RBP12.91□□□□□ -0.34
USH1C-204ENST00000526313 REG1BP48304 166 aa12.91□□□□□ -0.34
USH1C-204ENST00000526313 SLC35E3Q7Z769 313 aa12.91□□□□□ -0.34
USH1C-204ENST00000526313 GGTLC1Q9BX51 225 aa12.91□□□□□ -0.34
USH1C-204ENST00000526313 NDUFA4L2Q9NRX3 87 aa12.91□□□□□ -0.34
USH1C-204ENST00000526313 WASHC3Q9Y3C0 194 aa12.91□□□□□ -0.34
USH1C-204ENST00000526313 EIF3GO75821 320 aaKnown RBP eCLIP12.91□□□□□ -0.34
USH1C-204ENST00000526313 USF1P22415 310 aaPredicted RBP12.91□□□□□ -0.34
USH1C-204ENST00000526313 MC5RP33032 325 aa12.91□□□□□ -0.34
USH1C-204ENST00000526313 C2orf83Q53S99 150 aa12.91□□□□□ -0.34
USH1C-204ENST00000526313 FOLR2P14207 255 aa12.9□□□□□ -0.34
USH1C-204ENST00000526313 IL3RAP26951 378 aa12.9□□□□□ -0.34
USH1C-204ENST00000526313 RAB13P51153 203 aa12.9□□□□□ -0.34
USH1C-204ENST00000526313 AKIRIN2Q53H80 203 aa12.9□□□□□ -0.34
USH1C-204ENST00000526313 TGIF2LXQ8IUE1 241 aa12.9□□□□□ -0.34
USH1C-204ENST00000526313 LY6G5BQ8NDX9 201 aa12.9□□□□□ -0.34
USH1C-204ENST00000526313 OR1L8Q8NGR8 309 aa12.9□□□□□ -0.34
USH1C-204ENST00000526313 NEU4Q8WWR8 484 aaPredicted RBP12.9□□□□□ -0.34
USH1C-204ENST00000526313 TVP23CQ96ET8 276 aa12.9□□□□□ -0.34
USH1C-204ENST00000526313 NEIL1Q96FI4 390 aaPredicted RBP12.9□□□□□ -0.34
USH1C-204ENST00000526313 MIOXQ9UGB7 285 aa12.9□□□□□ -0.34
USH1C-204ENST00000526313 MALRD1Q5VYJ5 2156 aa12.9□□□□□ -0.34
USH1C-204ENST00000526313 A0A087WWC5 75 aa12.89□□□□□ -0.35
USH1C-204ENST00000526313 MAS1LP35410 378 aa12.89□□□□□ -0.35
USH1C-204ENST00000526313 CDC34P49427 236 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms