RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ZNF436Q9C0F3 470 aaPredicted RBP10.15□□□□□ -0.78
SMPD1-202ENST00000526280 ZNF430Q9H8G1 570 aaPredicted RBP10.15□□□□□ -0.78
SMPD1-202ENST00000526280 BET1LQ9NYM9 111 aa10.15□□□□□ -0.78
SMPD1-202ENST00000526280 VSIG4Q9Y279 399 aa10.15□□□□□ -0.78
SMPD1-202ENST00000526280 WSB1Q9Y6I7 421 aa10.15□□□□□ -0.78
SMPD1-202ENST00000526280 TRAV41A0A0B4J266 112 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 C3orf85A0A1B0GTC6 90 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 CREBL2O60519 120 aaPredicted RBP10.14□□□□□ -0.79
SMPD1-202ENST00000526280 B3GALNT1O75752 331 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 SERPINE2P07093 398 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 PPIFP30405 207 aaKnown RBP10.14□□□□□ -0.79
SMPD1-202ENST00000526280 TMEM267Q0VDI3 215 aaPredicted RBP10.14□□□□□ -0.79
SMPD1-202ENST00000526280 NDUFA5Q16718 116 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 C19orf54Q5BKX5 351 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 HIST2H2BDQ6DRA6 164 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 LAMTOR1Q6IAA8 161 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 OR4X2Q8NGF9 303 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 OR4A5Q8NH83 315 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 ABHD5Q8WTS1 349 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 ARPC1AQ92747 370 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 TP53RKQ96S44 253 aa10.14□□□□□ -0.79
SMPD1-202ENST00000526280 CITED2Q99967 270 aaPredicted RBP10.14□□□□□ -0.79
SMPD1-202ENST00000526280 SLC25A21Q9BQT8 299 aaPredicted RBP10.14□□□□□ -0.79
SMPD1-202ENST00000526280 FAM103A1Q9BTL3 118 aaKnown RBP10.14□□□□□ -0.79
SMPD1-202ENST00000526280 TEX13DA0A0J9YY54 714 aaPredicted RBP10.13□□□□□ -0.79
SMPD1-202ENST00000526280 CRYM-AS1A6NIL9 109 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 MARCH11A6NNE9 402 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 KRASP01116 189 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 IGKV1-39P01597 117 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 IGHG4P01861 327 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 IGKV1D-39P04432 117 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 RPA2P15927 270 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 G6PCP35575 357 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 ERVK-16P61578 105 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 TNXAQ16473 311 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 SP6Q3SY56 376 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 AKIRIN2Q53H80 203 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 TEX38Q6PEX7 206 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 COMMD1Q8N668 190 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 ADAD2Q8NCV1 583 aaKnown RBP10.13□□□□□ -0.79
SMPD1-202ENST00000526280 LFNGQ8NES3 379 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 DMBX1Q8NFW5 382 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 GRPEL2Q8TAA5 225 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 ZNF431Q8TF32 576 aaPredicted RBP10.13□□□□□ -0.79
SMPD1-202ENST00000526280 TMEM230Q96A57 120 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 NAA60Q9H7X0 242 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 TMEM140Q9NV12 185 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 MGAT4CQ9UBM8 478 aa10.13□□□□□ -0.79
SMPD1-202ENST00000526280 TET2Q6N021 2002 aaPredicted RBP10.12□□□□□ -0.79
SMPD1-202ENST00000526280 TRAV3A0A0B4J244 114 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 TCRBV4S1A1TA0A5B7 111 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 MSGN1A6NI15 193 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 UPK2O00526 184 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 ACTL6BO94805 426 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 IGLV1-40P01703 118 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 FGF2P09038 288 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 UCP1P25874 307 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 MAS1LP35410 378 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 RPL8P62917 257 aaKnown RBP10.12□□□□□ -0.79
SMPD1-202ENST00000526280 FOXE3Q13461 319 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 ECSCRQ19T08 205 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 UNQ5815/PRO19632Q6UWF5 114 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 NDUFA11Q86Y39 141 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 C9orf62Q8N4C0 152 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 RNF152Q8N8N0 203 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 SRSF12Q8WXF0 261 aaKnown RBP10.12□□□□□ -0.79
SMPD1-202ENST00000526280 SEC22AQ96IW7 307 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 ALX4Q9H161 411 aaPredicted RBP10.12□□□□□ -0.79
SMPD1-202ENST00000526280 HSPB11Q9Y547 144 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 TRRAPQ9Y4A5 3859 aa10.12□□□□□ -0.79
SMPD1-202ENST00000526280 ADARB2-AS1A8MUL3 147 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 OPN1MWP04001 364 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 ELANEP08246 267 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 GIPP09681 153 aaPredicted RBP10.11□□□□□ -0.79
SMPD1-202ENST00000526280 OR5AC1P0C628 307 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 OPN1MW2P0DN77 364 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 OPN1MW3P0DN78 364 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 AKR1C4P17516 323 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 HLA-GP17693 338 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 PSMB8P28062 276 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 SGPP2Q8IWX5 399 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 OR52B4Q8NGK2 314 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 GLYATL2Q8WU03 294 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 GALNT14Q96FL9 552 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 TMEM68Q96MH6 324 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 TMEM222Q9H0R3 208 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 FOXA2Q9Y261 457 aaPredicted RBP10.11□□□□□ -0.79
SMPD1-202ENST00000526280 KCNIP3Q9Y2W7 256 aa10.11□□□□□ -0.79
SMPD1-202ENST00000526280 TSSC4Q9Y5U2 329 aaPredicted RBP10.11□□□□□ -0.79
SMPD1-202ENST00000526280 A0A1W2PN81 502 aa10.1□□□□□ -0.79
SMPD1-202ENST00000526280 E7EUB6 86 aa10.1□□□□□ -0.79
SMPD1-202ENST00000526280 SOX15O60248 233 aa10.1□□□□□ -0.79
SMPD1-202ENST00000526280 CDS2O95674 445 aa10.1□□□□□ -0.79
SMPD1-202ENST00000526280 RPLP1P05386 114 aaKnown RBP10.1□□□□□ -0.79
SMPD1-202ENST00000526280 CHRNA7P36544 502 aa10.1□□□□□ -0.79
SMPD1-202ENST00000526280 RPL27AP46776 148 aaKnown RBP10.1□□□□□ -0.79
SMPD1-202ENST00000526280 RAP2BP61225 183 aa10.1□□□□□ -0.79
SMPD1-202ENST00000526280 SUPT4H1P63272 117 aaKnown RBP10.1□□□□□ -0.79
SMPD1-202ENST00000526280 DHODHQ02127 395 aa10.1□□□□□ -0.79
SMPD1-202ENST00000526280 CXorf66Q5JRM2 361 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms