RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 PLEKHA2Q9HB19 425 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 EXTL2Q9UBQ6 330 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 FBXL7Q9UJT9 491 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 DMRT1Q9Y5R6 373 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 SMAD5-AS1Q9Y6J3 95 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 DNAH9Q9NYC9 4486 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.24□□□□□ -0.77
USH1C-203ENST00000526181 PPP5D1E7EU14 171 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 M0QYG6 137 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 GPR31O00270 319 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 NDUFB8O95169 186 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 HLA-AP01891 365 aaKnown RBP10.24□□□□□ -0.77
USH1C-203ENST00000526181 CRYGCP07315 174 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 CSN3P07498 182 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 CTRB1P17538 263 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 LPAR6P43657 344 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 TSPAN5P62079 268 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 ZNF585BQ52M93 769 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 PHLDA2Q53GA4 152 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 CTRB2Q6GPI1 263 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 SLC25A42Q86VD7 318 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 CD300LFQ8TDQ1 290 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 FCAMRQ8WWV6 532 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 AP3S1Q92572 193 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 BORCS5Q969J3 196 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 DGCR14Q96DF8 476 aaKnown RBP10.24□□□□□ -0.77
USH1C-203ENST00000526181 CCDC140Q96MF4 163 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 AIFM2Q9BRQ8 373 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 MIXL1Q9H2W2 232 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 COMMD9Q9P000 198 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 KLK11Q9UBX7 282 aa10.24□□□□□ -0.77
USH1C-203ENST00000526181 IGLC7A0M8Q6 106 aa10.23□□□□□ -0.77
USH1C-203ENST00000526181 MARCH11A6NNE9 402 aa10.23□□□□□ -0.77
USH1C-203ENST00000526181 EDN2P20800 178 aa10.23□□□□□ -0.77
USH1C-203ENST00000526181 F2RP25116 425 aa10.23□□□□□ -0.77
USH1C-203ENST00000526181 G6PCP35575 357 aa10.23□□□□□ -0.77
USH1C-203ENST00000526181 CMTM1Q8IZ96 169 aa10.23□□□□□ -0.77
USH1C-203ENST00000526181 OR10W1Q8NGF6 305 aa10.23□□□□□ -0.77
USH1C-203ENST00000526181 ABHD1Q96SE0 405 aa10.23□□□□□ -0.77
USH1C-203ENST00000526181 COMMD5Q9GZQ3 224 aa10.23□□□□□ -0.77
USH1C-203ENST00000526181 NSG2Q9Y328 171 aa10.23□□□□□ -0.77
USH1C-203ENST00000526181 IGLV11-55A0A075B6I3 123 aa10.22□□□□□ -0.77
USH1C-203ENST00000526181 KRASP01116 189 aa10.22□□□□□ -0.77
USH1C-203ENST00000526181 ADAMTSL5Q6ZMM2 481 aa10.22□□□□□ -0.77
USH1C-203ENST00000526181 TBC1D26Q86UD7 250 aa10.22□□□□□ -0.77
USH1C-203ENST00000526181 CLVS1Q8IUQ0 354 aaPredicted RBP10.22□□□□□ -0.77
USH1C-203ENST00000526181 LAX1Q8IWV1 398 aa10.22□□□□□ -0.77
USH1C-203ENST00000526181 OR52I2Q8NH67 350 aa10.22□□□□□ -0.77
USH1C-203ENST00000526181 TEX50A0A1B0GTY4 177 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 IZUMO1RA6ND01 250 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 MFSD2BA6NFX1 497 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 CTDSP2O14595 271 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 CD3DP04234 171 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 FRMD6-AS1P0C7T7 363 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 DEFA4P12838 97 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 ERVK-16P61578 105 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 WT1-ASQ06250 92 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 TATDN3Q17R31 274 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 KLK9Q2XQG4 91 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 CLEC19AQ6UXS0 136 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 SBSPONQ8IVN8 264 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 Q8N1Y9 231 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 OR4D10Q8NGI6 311 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 QTRT1Q9BXR0 403 aaKnown RBP10.21□□□□□ -0.77
USH1C-203ENST00000526181 KLK9Q9UKQ9 250 aa10.21□□□□□ -0.77
USH1C-203ENST00000526181 COL7A1Q02388 2944 aa10.21□□□□□ -0.78
USH1C-203ENST00000526181 DBX1A6NMT0 343 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 RGS5O15539 181 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 OR2C1O95371 312 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 DHFRP00374 187 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 IGKV1-39P01597 117 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 IGKV1D-39P04432 117 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 NHLRC4P0CG21 123 aaPredicted RBP10.2□□□□□ -0.78
USH1C-203ENST00000526181 PI3P19957 117 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 ARL3P36405 182 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 RNASE10Q5GAN6 216 aaKnown RBP10.2□□□□□ -0.78
USH1C-203ENST00000526181 LPCAT3Q6P1A2 487 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 SLC38A6Q8IZM9 456 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 ZC4H2Q9NQZ6 224 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 PEMTQ9UBM1 199 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 MTFP1Q9UDX5 166 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 U3KQK5 164 aa10.2□□□□□ -0.78
USH1C-203ENST00000526181 GGCTO75223 188 aaKnown RBP10.19□□□□□ -0.78
USH1C-203ENST00000526181 FGF2P09038 288 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 TRAPPC2P0DI81 140 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 TRAPPC2BP0DI82 140 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 OR13C7P0DN81 318 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 IGHV4-30-4P0DP06 118 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 HIST1H1BP16401 226 aaKnown RBP10.19□□□□□ -0.78
USH1C-203ENST00000526181 MECP2P51608 486 aaKnown RBP10.19□□□□□ -0.78
USH1C-203ENST00000526181 UCP3P55916 312 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 LHFPL1Q86WI0 220 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 DYNC2LI1Q8TCX1 351 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 EEF1AKMT3Q96AZ1 226 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 HINT2Q9BX68 163 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 NDUFA4L2Q9NRX3 87 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 SIGLEC8Q9NYZ4 499 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 OR51B2Q9Y5P1 312 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 SELENOKQ9Y6D0 94 aa10.19□□□□□ -0.78
USH1C-203ENST00000526181 IFNA6P05013 189 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms